Moleküler markerlerin hayvan yetiştiriciliği ve genetiğinde kullanımı

Son 30 yı lda moleküler biyolojinin geli ş imi çiftlik hayvanları n ı n seleksiyonu ve genetik ilerlemesi içinheyecan verici yakla ş ı mlar olu ş turmu ş tur. DNA markerleri bireysel tan ı mlama, ebeveyn tayini vegenetik hastal ı kları n kontrolünde ş imdiden yayg ı n bir uygulama alan ı bulmu ş tur. Fakat as ı lkullan ı mları genotipik seleksiyon uygulamaları için kantitatif karakter lokusları n ı n belirlenmesiyönünde olacaktı r. Moleküler markerlerin hayvan ı slah ı ve geneti ğ indeki uygulama alanları n ı pratikveya k ı sa dönem ve uzun dönem olmak üzere iki ana ba ş l ı k altı nda toplamak mümkündür. Pratikveya kı sa dönem uygulama alanları bireysel tan ı mlama, ebeveyn tayini, genetik hastal ı kları nkontrolü, genetik uzakl ı ğı n tahmini, implantasyon öncesi yavru cinsiyetinin ve ikizli ğ inbelirlenmesidir. Uzun dönem uygulama alanları genom haritaları n ı n olu ş turulmas ı , kantitatifkarakter lokusları n ı n belirlenmesi, marker destekli seleksiyon, genetik çe ş itlilik ve genetikkaynakları n ı n korunmas ı çal ı ş maları d ı r.

Applications of moleculer markers in animal breeding and genetics

Development of molecular biology during the past three decades has created new oppurtunities forthe selection and genetic improvement of livestock. DNA markers have already provided wideapplications in parentage verification, individual identification and control of genetic disorders. Theultimate use of DNA markers would be to identify quantitative trait loci in order to practice genotypicselection. It is possible that application of molecular markers in animal breeding and genetics canbe studied under two main headings as shortrange or immediate and longrange. Shortrange orimmediate applications are individual identification, parentage determination, control of geneticdisorders, genetic distance estimation, determination of twin zygosity and sexing of preimplantationembryos. Long range applications are genome mapping, determination of quantitative trait loci,marker assisted selection and biodiversity and conservation of genetic resources studies.

___

  • 1. Henderson CR. Applications of Linear Models in Animal Breeding. Canada, Guelph, University of Guelph1984.
  • 2. Walsh B. Minireview: Quantitative genetics in the age of genomics. Theor Popul Biol 2000; 59: 175-184.
  • 3. Montoldo HH, Herrera CA. Use of moleculer markers and major genes in the genetic ı mprovement of livestock. Electron J Biotechn 1998; 1: 83-89.
  • 4. Do ğ an M, Kayg ı s ı z A.Türkiye’deki İsviçre Esmer Sı ğ ı rlarda Süt Protein Polimorfizmi ile Süt Verim Özellikleri Aras ı ndaki ili ş kiler. Turk J Vet Anim Sci 1999; 23: 47-49.
  • 5. Schwerin M, Brockmann G, Vanselow J, et al. Perspectives of molecular genome analysis in livestock improvement. Arch Tierzucht 1995; 38: 21-31.
  • 6. Vanl ı Y. Atatürk Üniversitesi Koyun Sürülerinde Beta- Globulin Polimorfizminin Geneti ğ i ve Kantitatif Karakterlerle Ba ğ lantı s ı . Profesörlük Takdim Tezi, Erzurum: Atatürk Üniversitesi, Ziraat Fakültesi Zootekni Bölümü, 1987.
  • 7. Lara MAC, Gama LT, Bufarah G, et al. Genetic polymorphisms at the k-casein locus in pantaneiro cattle. Arch Zootec 2002; 51: 99-105.
  • 8. Lin CY, Sabour MP, Lee AJ. Direct typing to milk proteins as an aid for genetic improvement of dairy bulls and cows. Animal Breeding Abstracts 1992; 60: 1-10.
  • 9. Hillel J, Dunnington EA, Siegel PB. DNA Markers in poultry breeding and genetic analyses. Poultry Sci 1992; 4: 169- 186.
  • 10. Kozano ğ lu H. Hayvan Islah ı ve Geneti ğ inde Kullan ı lan Moleküler Teknolojiler. Yüksek Lisans Tezi, İzmir: Ege Üniversitesi, Fen Bilimleri Enstitüsü, 2002.
  • 11. Marle-Köster EV, Nel LH. Genetic markers and their application in livestock breeding in South Africa. S Afr J Anim Sci 2003; 33: 1-10.
  • 12. Nicholas FW. Introduction to Veterinary Genetics. Oxford University Press, U.K., 1996.
  • 13. Kinghorn BP, van Arendonk JAM, Hetzel J. Detection and use of major genes in animal breeding. AgBiotech News and Information 1994; 6: 297-302.
  • 14. Mitra A, Yadav BR, Nazir A, et al. Molecular markers and their applications in livestock improvement. Current Science 1999; 77: 1045-1053.
  • 15. Geldermann H. Application of Genome Analysis in Animal Breeding. In: Geldermann H, Ellendorf F. (Editors). Genome Analysis in Domestic Animals. VCH Verlagsgesellschaft, Weinheim, New York 1990; 291-323.
  • 16. Jeffreys AJ, Wilson V, Thein SL. Individual-specific 'fingerprints' of human DNA. Nature 1985; 316: 76-79. 17. Glowatzki-Mullis ML, Gaillard C, Wigger G, et al. Microsatellite-based parentage control in cattle. Anim Genet 1995; 26: 7-12.
  • 18. Kurar E, Bulut Z, Ça ğ layan T, et al. Investigation of genetic diversity and paternity in Kangal White Karaman rams using microsatellite markers. Kafkas Univ Vet Fak Derg 2012; 18: 973-977.
  • 19. Anonim. “Etlik Veteriner Kontrol ve Ara ş tı rma Enstitüsü”. http://www.etlikvet.gov.tr/tr/page.asp?id=28/ 27.01.2014.
  • 20. Anonim. “Yüksek Komiserler Kurulu”. http://www.ykk.gov.tr/ Ekler/ASB_5.pdf/31.01.2014.
  • 21. Vaiman M, Cotinot C, Kirszenbaum M, et al. Sexing of bovine embryos using male-specific nucleic acid probes. Third World Congress on Sheep and Beef Cattle Breeding. Paris, France, 19-23 June 1988; 93-105.
  • 22. Peura T, Hyttinen JM, Turunen M, et al. Areliable sex determination assay for bovine preimplantation embryos using the polymerase chain reaction. Theriogenology 1991; 35: 547-555.
  • 23. Thibier M, Nibart M. The sexing of bovine embryos in the field. Theriogenology 1995; 43: 71-80.
  • 24. Machaty Z, Paldi A, Caski T, et al. Biopsy and sex determination by PCR of IVF bovine embryos J Reprod Fertil 1993; 98: 467-470.
  • 25. Agrawala PL, Wagner VA, Geldermann H. Sex determination and milk protein genotyping of preimplantation stage bovine embryos using multiplex PCR. Theriogenology 1992; 38: 969-78.
  • 26. Chrenek P, Bulla J. Simultaneous analysis of sex determination and κ-casein genotypes from bovine preimplantation embryos. Czech J Anim Sci 2002; 47: 1-5
  • 27. Kageyama S, Hirayama H. Sexing of Bovine Preimplantation Embryos using Loop-Mediated Isothermal Amplification (LAMP). Journal of Mammalian Ova Research 2012; 29: 113-118.
  • 28. Yang H, Zhong F, Yang Y, et al. Sex determination of bovine preimplantation embryos by oligonucleotide microarray. Anim Reprod Sci 2013; 139: 18-24.
  • 29. Nowacka J, Switonski M, Mackowski M, et al. The ambiguity of freemartinism diagnosis in cattle revealed by cytogenetic and molecular techniques. Czech J Anim Sci 2004; 49: 239-243.
  • 30. Sohn S, Cho E, Son W, Lee C. Diagnosis of bovine freemartinism by fluorescence in situ hybridization on interphase nuclei using a bovine Y chromosome-specific DNA probe. Theriogenology 2007; 68: 1003-1011.
  • 31. Plante Y, Schmutz SM, Lang KDM, Moker JS. Detection of leucochimaerism in bovine twins by DNA fingerprinting. Anim Genet 1992; 23: 295-302.
  • 32. Rejduch B, Slota E, Janik A, Zabek T. Identification of blood cell chimerism in bovine heterosexual twins using blood groups, karyotype and DNA microsatellite polymorphism analysis. Ann Anim Sci 2001; 2: 13-18.
  • 33. Schellander K, Peli J, Taha TA, et al. Diagnosis of bovine freemartinism by the polymerase chain reaction method. Anim Genet 1992; 23: 549-551.
  • 34. Ennis S, Vaughan L, Gallangher TF. The diagnosis of freemartinism in cattle using sex-specific DNA sequences. Res Vet Sci 1999; 67: 111-112.
  • 35. Justi A, Hecht W, Herzog A, et al. Comparison of different methods for the diagnosis of freemartinism: blood group serology, cytology and polymerase chain reaction (in German, with English summary). Deut Tierarztl Woch 1995; 102: 471-474.
  • 36. Olsaker I, Jorgensen CB, Hellemann AL, et al. A fast and highly sensitive method for detecting freemartinism in bovine twins using immunomagnetic beads and Y-specific PCR primers. Anim Genet 1993; 24: 311-313.
  • 37. Erhardt G, Weimann C. Use of molecular markers for evaluation of genetic diversity and in animal production. Archivos Latinoamericanos de Produccion Animal 2007; 15(S1): 63-66.
  • 38. Tapio M, Ozerov M, Tapio I, et al. Microsatellite-based genetic diversity and population structure of domestic sheep in northern Eurasia. BMC Genet 2010; 11: 76.
  • 39. Negrini R, Nijman IJ, Milanesi E, et al. Differentiation of European cattle by AFLP fingerprinting. Anim Genet 2007; 38: 60-66.
  • 40. İvgin R, Bilgen G. Estimation of genetic distance in meat and layer pure lines using randomly amplified polymorphic DNA. Turk J Vet Anim Sci 2002; 26: 1117-1120.
  • 41. Elmaci C, Oner Y, Ozis S, et al. RAPD analysis of DNA polymorphism in Turkish sheep breeds. Biochem Genet 2007; 45: 691-696.
  • 42. Kingsbury DT. Genetics of response to slow virus (prion) infection. Annu Rev Genet 1990; 24: 115-132.
  • 43. Meydan H, Yildiz MA, Agerholm JS. Screening for bovine leukocyte adhesion deficiency, deficiency of uridine monophosphate synthase, complex vertebral malformation, bovine citrullinaemia, and factor XI deficiency in Holstein cows reared in Turkey. Acta Vet Scand 2010; 52: 56.
  • 44. Norouzy A, Nassiry MR, Shahrody FE, et al. Identification of bovine leucocyte adhesion deficiency (BLAD) carriers in Holstein and Brown Swiss AI Bulls in Iran. Russ J Genet 2005; 41: 1409-1413.
  • 45. Anonim. “Human Genome Project”. http://web.ornl.gov/sci/ techresources/Human_Genome/index.shtml/16.01.2014.
  • 46. Baltimore D. Our genome unveiled. Nature 2001; 409: 814- 816.
  • 47. Womack JE. Mapping Animal Genomes. In: Dodds WJ, Womack JE. (Editors). Molecular Genetics, Gene Transfer and Therapy (Advances in Veterinary Medicine). San Diego: Academic Press, 1997; 40: 157-190.
  • 48. Rubin GM. The Draft sequences: Comparing species. Nature 2001; 409: 820-821
  • 49. Dodgson JB, Cheng HH. Poultry genomics: An alien perspective. Ag Biotech Net 1999; 1: 1-5
  • 50. Hayes H, Elduque M, Gautier L, et al. Gene mapping progress in cattle and updated comparative map with man, mouse, rat and pig. Proceedings of the XXVIII International Conference on Animal Genetics (ISAG). Göttingen, Germany, 11-15 August 2002.
  • 51. Schmid M, Nanda I, Guttenbach M, et al. First report on chicken genes and chromosomes 2000. Cytogenet Cell Genet 2000; 90: 169-218.
  • 52. Womack JE, Johnson JS, Owens EK, et al. A whole- genome radiation hybrid panel for bovine gene mapping. Mamm Genome 1997; 8: 854-856.
  • 53. Band MR, Larson JH, Reibeiz M, et al. An ordered comparative map of the cattle and human genomes. Genome Res 2000; 10: 1359-1368.
  • 54. O'Brien SJ. Mammalian genome mapping: Lessons and prospects. Curr Opin Genet Dev 1991; 1: 105-111.
  • 55. Rhodes M, Straw R, Fernando S, et al. High resolution microsatellite map of the mouse genome. Genome Res 1998; 8: 531-542.
  • 56. Anonim. “INRA Biotechnology Laboratories”. http://locus. jouy.inra.fr/10.02.2014.
  • 57. Anonim. “Roslin Institute ArkDB”. http://www.thearkdb.org/ arkdb/22.01.2014.
  • 58. Anonim. “National Animal Genome Research Program”. http://www.animalgenome.org/13.02.2014.
  • 59. Beuzen ND, Stear MJ, Chang KC. Molecular markers and their use in animal breeding. Vet J 2000; 160: 42-52.
  • 60. Bovenhuis H, van Arendonk JAM, Davis G, et al. Detection and mapping of quantitative trait Loci in Farm Animals. Livest Prod Sci 1997; 52: 135-144.
  • 61. Sonstegard TS, van Tassel CP, Ashwell MS. Dairy cattle genomics: Tools to accelerate geneticimprovement. J Anim Sci 2001; 79: 307-315.
  • 62. Haley C, Visscher P. DNA markers and genetic testing in farm animal improvement: Current applications and future prospects. Annual Report (98-99), Roslin Institute, Edinburgh 1999; 28-39.
  • 63. Lien S. Gene technology in animal breeding. Acta Agr Scand, Section A - Animal Science 1998; 28: 33-37
  • 64. Marshall DM. Genetics of meat quality. In: Fries R, Ruvinsky A. (Editors). The Genetics of Cattle. CABI Publishing, Wallingford, UK, 1999; 605-636.
  • 65. Casas E, Shackelford SD, Keele JW, et al. Quantitative trait loci affecting growth and carcass composition of cattle segregating alternate forms of myostatin. J Anim Sci 2000; 78: 560-569.
  • 66. Coppieters W, Riquet J, Arranz JJ, et al. A QTL with major effect on milk yield and composition maps to bovine chromosome 14. Mamm Genome 1998; 9: 540-544.
  • 67. Vaiman D. The molecular genetics of cattle. In: Fries R, Ruvinsky A. (Editors). The Genetics of Cattle. Wallingford, UK: CABI Publishing, 1999; 123-161.
  • 68. Ashwell MS, Da Y, Vanraden PM, et al. Detection of putative loci affecting conformational type traits in an elite population of United States Holsteins using microsatellite markers. J Dairy Sci 1998; 81: 1120-1125.
  • 69. Van Kaam JBCHM, van Arendonk JAM, Groenen MAM, et al. Whole genome scan for quantitative trait loci affecting body weight in chickens using a three generation design. Livest Prod Sci 1998; 54: 133-150.
  • 70. Anonim. “Animal QTL Database”. http://www.animal genome.org/cgi-bin/QTLdb/index/30.05.2014.
  • 71. Sax K. The association of size differences with seed-coat pattern and pigmentation in Phaseolus vulgaris. Genetics 1923; 8: 552-560.
  • 72. Davis GP, Denise SK. The impact of genetic markers on selection. J Anim Sci 1998; 76: 2331-2339.
  • 73. Smith C, Smith DB. The need for close linkages in marker- assisted seleciton for economic merit in livestock. Animal Breeding Abstracts 1993; 61: 197-204.
  • 74. Anonim. “Prizer Hayvan Geneti ğ i”. https://www.pfizeranimal genetics.com.au/10.02.2014.
  • 75. Anonim. “Igenity Testing Service”. http://www.igenity.com/ 15.09.2013.
  • 76. Mercan L, Okumu ş A. Hayvancı l ı kta Genetik Çe ş itlilik ve DAD-IS. 4. Ulusal Zootekni Bilim Kongresi. Isparta, 1-3 Eylül 2004.
  • 77. Scherf BD. Developing the global inventory for poultry genetic resources. Third Global Conference on conservation of domestic animal genetic resources. Queens University, Canada, 1-5 August 1994; 81-93.
  • 78. Gandini GC, Oldenbroek JK. Choosing the conservation strategy. In: Oldenbroek JK. (Editor). Genebanks and the Conservation of Farm Animal Genetic Resources. Lelystad, Netherlands: DLO Institute for Animal Science and Health, 1999; 11-31.
  • 79. Buchanan FC, Adams LJ, Littlejohn RP, et al. Determination of evolutionary relationships among sheep breeds using microsatellites. Genomics 1994; 22: 397-403.
  • 80. Van Zeveren A, Peelman L, Weghe AVD, et al. A genetic study of four Belgian pig populations by means of seven microsatellite loci. J Anim Breed Genet 1995; 112: 191- 204.
  • 81. MacHugh DE, Shriver MD, Loftus RT, et al. Microsatellite DNA variation and the evolution, domestication and phylogeography of Taurine and Zebu cattle (Bos taurus and Bos indicus). Genetics 1997; 146: 1071-1086.
  • 82. Vanhala T, Tuiskula-Haavisto M, Elo K, et al. Evaluation of genetic variability and genetic distances between eight chicken lines using microsatellite markers. Poultry Sci 1998; 77: 783-790.
  • 83. Krüger K, Stranzinger G, Rieders S. A full genome scan panel of horse (Equus caballus) microsatellite markers applied to different equid species. Proceedings of the XXVIII International Conference on Animal Genetics (ISAG). Göttingen, Germany, 11-15 August 2002.
Fırat Üniversitesi Sağlık Bilimleri Veteriner Dergisi-Cover
  • ISSN: 1308-9323
  • Yayın Aralığı: Yılda 3 Sayı
  • Yayıncı: Prof.Dr. Mesut AKSAKAL