Keratin 14 is a novel interaction partner of keratinocyte differentiation regulator: receptor-interacting protein kinase 4

The epidermis, the outer layer of the skin, is formed by stratified keratinocyte layers. The self-renewal of the epidermis is provided by sustained proliferation and differentiation of the keratinocyte stem cells localized to the basal layer of the epidermis. Receptorinteracting protein kinase 4 (RIPK4) is an important regulator of keratinocyte differentiation, mutations of which are associated with congenital ectodermal malformations. In an attempt to identify the molecular basis of RIPK4's function, we applied yeast two-hybrid screen (Y2H) and found basal layer-specific keratin filament component keratin 14 (KRT14) as a novel RIPK4-interacting partner. During keratinocyte differentiation, layer-specific keratin composition is tightly regulated. Likewise, the basal layer specific KRT14/keratin 5 (KRT5) heterodimers are replaced by keratin 1 (KRT1)/keratin 10 (KRT10) in suprabasal layers. The regulation of keratin turnover is under the control of signaling associated with posttranslational modifications in which phosphorylation plays a major role. In this study, we verified the KRT14-RIPK4 interaction, which was identified with Y2H, in mammalian cells and showed that the interaction was direct by using proteins expressed in bacteria. According to our results, the N-terminal kinase domain of RIPK4 is responsible for KRT14-RIPK4 interaction; however, the RIPK4 kinase activity is dispensable for the interaction. In accordance with their interaction, RIPK4 and KRT14 colocalize within the cells, particularly at keratin filaments associated with perinuclear ring-like structures. Moreover, RIPK4 did not show any effect on KRT14/KRT5 heterodimer formation. Our results suggest that RIPK4 may regulate the keratin turnover required for keratinocyte differentiation through interacting with KRT14.

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  • Bähr C, Rohwer A, Stempka L, Rincke G, Marks F et al. (2000). DIK, a novel protein kinase that interacts with protein kinase Cδ. Cloning, characterization, and gene analysis. Journal of Biological Chemistry 275 (46): 36350-36357. doi: 10.1074/jbc. M004771200
  • Blanpain C, Fuchs E (2009). Epidermal homeostasis: a balancing act of stem cells in the skin. Nature Reviews Molecular Cell Biology 10 (3): 207-217. doi: 0.1038/nrm2636
  • Busch T, Armacki M, Eiseler T, Joodi G, Temme C et al. (2012). Keratin 8 phosphorylation regulates keratin reorganization and migration of epithelial tumor cells. Journal of Cell Science 125 (9): 2148-2159. doi: 10.1242/jcs.080127
  • Coulombe PA, Kerns ML, Fuchs E (2009). Epidermolysis bullosa simplex: a paradigm for disorders of tissue fragility. Journal of Clinical Investigation 119 (7): 1784-1793. doi: 10.1172/ JCI38177
  • Coulombe PA, Omary MB (2002). ‘Hard’ and ‘soft’ principles defining the structure, function and regulation of keratin intermediate filaments. Current Opinion in Cell Biology 14 (1): 110-122.
  • Fields S, Song O (1989). A novel genetic system to detect protein–protein interactions. Nature 340 (6230): 245-246. doi: 10.1038/340245a0
  • Fuchs E, Nowak JA (2008). Building epithelial tissues from skin stem cells. Cold Spring Harbor Symposia on Quantitative Biology 73: 333-350. doi: 10.1101/sqb.2008.73.032
  • Fuchs E, Weber K (1994). Intermediate filaments: structure, dynamics, function, and disease. Annual Review of Biochemistry 63: 345-382. doi: 10.1146/annurev.bi.63.070194.002021
  • Hofmann I, Mertens C, Brettel M, Nimmrich V, Schnolzer M et al. (2000). Interaction of plakophilins with desmoplakin and intermediate filament proteins: an in vitro analysis. Journal of Cell Science 113: 2471-2483.
  • Holland P, Willis C, Kanaly S, Glaccum M, Warren A et al. (2002). RIP4 is an ankyrin repeat-containing kinase essential for keratinocyte differentiation. Current Biology 12 (16): 1424-1428.
  • Huang CS, Oberbeck N, Hsiao YC, Liu P, Johnson AR et al. (2018). Crystal structure of Ripk4 reveals dimerization-dependent kinase activity. Structure 26 (5): 767-777. doi: 10.1016/j. str.2018.04.002
  • Jordan M, Schallhorn A, Wurm FM (1996). Transfecting mammalian cells: optimization of critical parameters affecting calciumphosphate precipitate formation. Nucleic Acids Research 24 (4): 596-601. doi: 10.1093/nar/24.4.596
  • Kalay E, Sezgin O, Chellappa V, Mutlu M, Morsy H et al. (2012). Mutations in RIPK4 cause the autosomal-recessive form of popliteal pterygium syndrome. American Journal of Human Genetics 90 (1): 76-85. doi: 10.1016/j.ajhg.2011.11.014
  • Kim HJ, Choi WJ, Lee CH (2015). Phosphorylation and reorganization of keratin networks: implications for carcinogenesis and epithelial mesenchymal transition. Biomolecules & Therapeutics 23 (4): 301-312. doi: 10.4062/biomolther.2015.032
  • Kim S, Wong P, Coulombe PA (2006). A keratin cytoskeletal protein regulates protein synthesis and epithelial cell growth. Nature 441: 362-365. doi: 10.1038/nature04659
  • Kwa MQ, Huynh J, Aw J, Zhang L, Nguyen T et al. (2014). Receptorinteracting protein kinase 4 and interferon regulatory factor 6 function as a signaling axis to regulate keratinocyte differentiation. Journal of Biological Chemistry 289 (45): 31077-31087. doi: 10.1074/jbc.M114.589382
  • Lane EB (1994). Keratin diseases. Current Opinion in Genetics and Development 4 (3): 412-418.
  • Lee P, Jiang S, Li Y, Yue J, Gou X et al. (2017). Phosphorylation of Pkp1 by RIPK4 regulates epidermal differentiation and skin tumorigenesis. EMBO Journal 36 (13): 1963-1980. doi: 10.15252/ embj.201695679
  • Loo LH, Laksameethanasan D, Tung YL (2014). Quantitative protein localization signatures reveal an association between spatial and functional divergences of proteins. PLoS Computational Biology 10 (3): e1003504. doi: 10.1371/journal.pcbi.1003504
  • Loschke F, Seltmann K, Bouameur JE, Magin TM (2015). Regulation of keratin network organization. Current Opinion in Cell Biology 32: 56-64. doi: 10.1016/j.ceb.2014.12.006
  • Marinari B, Ballaro C, Koster MI, Giustizieri ML, Moretti F et al. (2009). IKKα is a p63 transcriptional target involved in the pathogenesis of ectodermal dysplasias. Journal of Investigative Dermatology 129 (1): 60-69. doi: 10.1038/jid.2008.202
  • Meylan E, Martinon F, Thome M, Gschwendt M, Tschopp J (2002). RIP4 (DIK/PKK), a novel member of the RIP kinase family, activates NF-kappa B and is processed during apoptosis. EMBO Reports 3 (12): 1201-1208. doi: 10.1093/embo-reports/kvf236
  • Mitchell K, O’Sullivan J, Missero C, Blair E, Richardson R et al. (2012). Exome sequence identifies RIPK4 as the BartsocasPapas syndrome locus. American Journal of Human Genetics 90 (1): 69-75. doi: 10.1016/j.ajhg.2011.11.013
  • Phizicky EM, Fields S (1995). Protein-protein interactions: methods for detection and analysis. Microbiological Reviews 59 (1): 94- 123.
  • Ran FA, Hsu PD, Wright J, Agarwala V, Scott DA et al. (2013). Genome engineering using the CRISPR-Cas9 system. Nature Protocols 8 (11): 2281-2308. doi: 10.1038/nprot.2013
  • Romano RA, Birkaya B, Sinha S (2007). A functional enhancer of keratin14 is a direct transcriptional target of ΔNp63. Journal of Investigative Dermatology 127 (5): doi: 1175-1186. 10.1038/ sj.jid.5700652
  • Rountree RB, Willis CR, Huyen D, Blumberg H, Bailey K et al. (2010). RIP4 regulates epidermal differentiation and cutaneous inflammation. Journal of Investigative Dermatology 130 (1): 102-112. doi: 10.1038/jid.2009.223
  • Sawant MS, Leube RE (2017). Consequences of keratin phosphorylation for cytoskeletal organization and epithelial functions. International Review of Cell and Molecular Biology 330: 171- 225. doi: 10.1016/bs.ircmb.2016.09.005
  • Sedgwick SG, Smerdon SJ (1999). The ankyrin repeat: a diversity of interactions on a common structural framework. Trends in Biochemical Sciences 24 (8): 311-316.
  • Snider NT, Omary MB (2014). Post-translational modifications of intermediate filament proteins: mechanisms and functions. Nature Reviews Molecular Cell Biology 15 (3): 163-177. doi: 10.1038/nrm3753
  • Thomason HA, Zhou H, Kouwenhoven EN, Dotto GP, Restivo G et al. (2010). Cooperation between the transcription factors p63 and IRF6 is essential to prevent cleft palate in mice. Journal of Clinical Investigation 120 (5): 1561-1569. doi: 10.1172/ JCI40266
  • Wöll S, Windoffer R, Leube RE (2007). p38 MAPK-dependent shaping of the keratin cytoskeleton in cultured cells. Journal of Cell Biology 177 (5): 795-807. doi: 10.1083/jcb.200703174