Pooja POOJA, Satish KUMAR, R.s. BENIWAL, Jagdeep SINGH, Rishi Kumar BEHL, Virender Singh PAHIL

Host and Pathogen Factors Determining Yellow Rust Reaction in Wheat- An Overview

Anahtar Kelimeler:

Wheat, yellow rust, Puccinia striiformis, virulence, resistance genes, breeding methods

Host and Pathogen Factors Determining Yellow Rust Reaction in Wheat- An Overview

Among cereals, wheat is one of the most important crop globally, being a major component of food security. Among rust diseases of wheat, yellow rust is an important which result in considerable losses in normal and colossal losses in epidemic conditions. The disease-causing organism Puccinia striiformis is an obligate pathogen with diverse pathotypes which have the ability to invade resistance of the wheat varieties due to prevalence of new pathotypes. It is therefore, important to understand the virulence patterns of pathotypes and host resistant genes to create a mismatch for sustainable production. This review paper examines the losses due to yellow rust, variability in pathogen for virulence, migration of pathogen, meteorological pre-disposing factors, types and number of resistant genes governing yellow rust resistance at various plant growth stages, identification of resistant genes through conventional and molecular markers, conventional and biotechnological methods for developing yellow rust resistant wheat varieties and futuristic outlook to tackle yellow rust epidemic under climate change regime through breeding and management strategies.

Keywords:

Wheat, yellow rust, Puccinia striiformis, virulence, resistance genes, breeding methods,

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Adams TM, Olsson TSG, Ramírez-González RH, Bryant R and Bryson R, (2021). Rust expression browser: An open-source database for simultaneous analysis of host pathogen gene expression profiles with exp VIP. BMC Genomics, 22:166.
Adamski NH, Borrill P, Brinton J, Harrington SA and Marchal C, (2020). A roadmap for gene functional characterization in crops with large genomes: lessons from polyploid wheat. eLife 9: e55646.
Aktar-Uz-Zaman M, Tuhina-Khatun M, Hanafi MM, Sahebi M, (2017). Genetic analysis of rust resistance genes in global wheat cultivars: An overview. Biotechnology and Biotechnological Equipment, 31(3):431- 445.
Ali S, Gladieux P, Leconte M, Gautier A, Justesen AF, Hovmøller MS, Enjalbert J, and de VallavieillePope C, (2014a). Origin, migration routes and worldwide population genetic structure of the wheat yellow rust pathogen Puccinia striiformis f.sp. tritici. PLoS Pathogens 10.
Ali S, Leconte M, Rahman H, Saqib MS, Gladieux P, Enjalbert J, and de Vallavieille-Pope C, (2014b). A high virulence and pathotype diversity of Puccinia striiformis f.sp. tritici at its centre of diversity, the Himalayan region of Pakistan. Eur. J. Plant Pathol, 140:275–290.
Ali S, Rodriguez-Algaba J, Thach T, Sørensen CK, Hansen JG, Lassen P, Nazari K, Hodson DP, Justesen AF and Hovmøller MS, (2017). Yellow Rust Epidemics Worldwide Were Caused by Pathogen Races from Divergent Genetic Lineages. Front. Plant Sci. Sec. Evolutionary and Population Genetics, https://doi.org/10.3389/ fpls.2017.01057.
Arora S, Steuernagel B, Gaurav K, Chandramohan S and Long Y, (2019). Resistance gene cloning from a wild crop relative by sequence capture and association genetics. Nat Biotechnol, 37:139– 143.
Asseng S, Foster I and Turner NC, (2011). The impact of temperature variability on wheat yields. Global Change Biology, 17(2):997-1012.
Bahadur P. and Nagarajan S, (1985). Gene deployment for management of stem rust (Puccinia graminis Pers. F. sp. tritici Eriks & Henn.) of wheat. Indian J. agric. Sci, 55: 219-222.
Bhardwaj SC, Gangwar OP, Singh SB, Saharan MS and Sharma S, (2012). Rust situation and pathotypes of Puccinia species in Leh Leach in relation to recurrence of wheat rusts in India. Indian Phytopath, 65:230–32.
Bhardwaj SC, (2011). Resistance genes and adult plant rust resistance of released wheat varieties of India. Research Bulletin No.5, 33. Regional Station, Directorate of Wheat Research, Flowedale, Shimla 171002 (India).
Bouvet L, Holdgate S, James L, Thomas J, Mackay IJ and Cockram J, (2022). The evolving battle between yellow rust and wheat: implications for global food security. Theoretical and Applied Genetics,135:741–753
Boyd L, (2005). Can Robigus defeat an old enemy? Yellow rust of wheat. The Journal of Agricultural Science, 143(4):233-243.
Brar GS, (2015). Population structure of Puccinia striiformis f. sp. tritici, the cause of wheat stripe rust, in western Canada. Thesis, Master of Science submitted to University of Saskatchewan, Saskatoon, Canada.
Bulli P, Zhang J, Chao S, Chen X, and Pumphrey M, (2016). Genetic architecture of resistance to stripe rust in a global winter wheat germplasm collection. G3 (Bethesda), 6(8):2237-2253.
Cantu D, Segovia V, MacLearn D, Bayles R, Chen X, Kamoun S, Dubcovsky J, Saunders DGO and Uauy C, (2013). Genome analyses of the wheat yellow (stripe) rust pathogen Puccinia striiformis f. sp. tritici reveal polymorphic and haustoria expressed secreted proteins as candidate effectors. BMC Genomics, 14:270.
Chen S, Rouse MN, Zhang W, Zhang X, Guo Y and Briggs J, (2020). Wheat gene Sr60 encodes a protein with two putative kinase domains that confers resistance to stem rust. New Phytol, 225:948–959.
Chen WQ, Wu LR, Liu TG and Xu SC, (2009). Race dynamics, diversity and virulence evolution in Puccinia striiformis f. sp. tritici, the causal agent of bread wheat stripe rust in China from 2003 to 2007. Pl. Dis, 93: 1093-1101.
Chen XM, (2005). Epidemiology and control of stripe rust (Puccinia striiformis f. sp. tritici) on bread wheat. Can. J. Pl. Path, 27: 314-337.
Corredor-Moreno P, Minter F, Davey PE, Wegel E, Kular B, Brett P, Lewis CM, Morgan YML, Macías Pérez A, Lorolev AV, Hill L and Saunders DGO, (2021). The branched-chain amino acid aminotransferase TaBCAT1 modulates amino acid metabolism and positively regulates wheat rust susceptibility. Plant Cell. https:// doi. org/10.1093/plCurtis BC, Rajaram S and Macpherson HG, (2002). In Bread wheat improvement and production Number 30. Food and Agriculture Organization of the United Nations, Rome Italy. 554.
Dedeurwaerder G, Duvivier M, Mvuyenkure SM, Renard ME, Van Hese V, Marchal G, Moreau JM and Legrève A, (2011). Spore Traps Network: A New Tool for Predicting Epidemics of Wheat Yellow Rust. In: Communications in Agricultural and Applied Biological Sciences, Pubmed: online publication.
Ellis JG, Lagudah ES, Spielmeyer W and Dodds PN, (2014). The past, present and future of breeding rust resistant wheat. Frontiers in Plant Science, 5:641.
Francisco XR dV, Parlevliet JE and Zambolim L, (2001). Concepts in plant disease resistance. Fitopatologia Brasileira, 26:577-589.
Gardiner LJ, Brabbs T, Akhunov A, Jordan K and Budak H, (2019). Integrating genomic resources to present full gene and putative promoter capture probe sets for bread wheat. Gigascience, 8:giz018.
Gill KS, Nanda GS, Singh S and Aujla SS, (1980). Studies on multilines in wheat (Triticum aestivum L.) Breeding of a multiline variety by convergence of breeding lines. Euphytica, 29:125-128.
Hafeez AN, Sanu A, Ghosh S, Gilbert D, Howden RL and Wulf BBH, (2021). Creation and Judicious Application of a Wheat Resistance Gene Atla. Mol Pl, 14(7),1053-1070.
Higgins VJ, Lu H, Xing T, Gelli A and Blumwald E, (1998). The gene-for-gene concept and beyond: Interactions and signals. Can. J. of Plant Pathol, 20(2):150-157.
Hovmoller MS, Sorensen CK, Walter S and Justesen AF, (2011). Diversity of Puccinia striiformis on cereals and grasses. Annual Review of Phytopathol, 49:197-217.
Hysing SC, (2007). Genetic resources for disease resistance breeding in wheat. PhD thesis, submitted to Swedish University of Agricultural Sciences, Alnarp, Swedon.
Jevtić R, Župunski V, Lalošević M and Župunski LJ, (2017). Predicting potential winter bread wheat yield losses caused by multiple disease systems and climatic conditions. Crop Prot, 99: 17-25.
Jin Y, Szabo LJ and Carson M, (2010). Century-old mystery of Puccinia striformis life history solved with the identification of Berberis as an alternate host. Phytopathol, 100(5):432-435.
Jupe F, Witek K, Verweij W, Sliwka J and Pritchard L, (2013). Resistance gene enrichment sequencing (RenSeq) enables reannotation of the NB-LRR gene family from sequenced plant genomes and rapid mapping of resistance loci in segregating populations. Plant J, 76:530–544.
Juroszek P and von Tiedemann A, (2013). Climate change and potential future risks through wheat diseases: a review. European Journal of Plant Pathology, 136(1):21-33.
Kashyap S, Pannu PPS, Kaur G, Sandhu SK and Singh P, (2018). Effect of weather parameters on occurrence and development of stripe rust of wheat in central Punjab. Plant Dis. Research, 33 (1) 76-81.
Kaur S, Dhaliwal L and Kaur P, (2008). Impact of climate change on wheat disease scenario in Punjab. Journal of Research, 45:161-170. Khanfri S, Boulif M and Lahlali R, (2018). Yellow Rust (Puccinia striiformis): A Serious Threat to Wheat Production Worldwide. Not Sci Biol, 10(3):410-423.
Knott D, (2008). The genomics of stem rust resistance in wheat. Plant Sciences Department, University of Saskatchewan, Saskatoon, Saskatchewan, S7N 5A8, Canada.
Kumar J, Nayar SK, Prashar M, Bhardwaj SC and Bhatnagar R, (1994). New variants 47S103 and 102S100 of Puccinia striiformis West. Indian Phytopathology, 47: 258-259.
Kumar S, Kumari J, Bansal R, Kuri B, Singh AK, Wankhede D, Akhtar J and Khan Z, (2015). Slow rusting-an effective way to achieve durable resistance against leaf rust in wheat. Wheat Information Service, 120:26.
Line RF, (2002). Stripe rust of wheat and barley in North America: a retrospective historical review. Annual Review in Phytopathology, 40:75-118.
Liu B, Chen X and Kang Z, (2012). Gene sequences reveal heterokaryotic variations and evolutionary mechanisms in Puccinia striiformis, the stripe rust pathogen. Open Journal of Genomics, 1(1).
Luo M, Zie L, Chakraborty S, Wang A, Matny O and Jugovich M, (2021). A five-transgene cassette confers broad-spectrum resistance to a fungal rust pathogen in wheat. Nat Biotechnol. https:// doi.org/10.1038/s41587-020-00770-xcell/koab049
Ma Q and Shang H, (2009). Ultrastructure of stripe rust (Puccinia striiformis f. sp. tritici) interacting with slow-rusting, highly resistant, and susceptible wheat cultivars. Journal of Plant Pathology, 1:597-606.
Mabrouk OI, Fahim MA, Abd El, Badeea OE and Omara RI, (2022). The Impact of Wheat Yellow Rust on Quantitative and Qualitative Grain Yield Losses under Egyptian Field Conditions. Egyptian Journal of Phytopathol, 50 (1)1-19. DOI 10.21608/ejp.2022.117996.1054.
Miedaner T, (2016). Breeding strategies for improving plant resistance to diseases. In: Advances in plant breeding strategies: Agronomic, Abiotic and Biotic Stress Traits. Eds Al-Khayri JM, Jain SM and Johnson DV, Springer London, 1115 pp.
Mallard S, Gaudet D, Aldeia A, Abelard C, Besnard A, Sourdille P and Dedryver F, (2005). Genetic analysis of durable resistance to yellow rust in bread wheat. Theoretical and Applied Genetics, 110(8):1401-1409.
Markell S and Milus E, (2008). Emergence of a novel population of Puccinia striiformis f. sp. tritici in eastern United States. Phytopathology, 98(6):632- 639.
Marsalis MA and Goldberg NP, (2016). Leaf, Stem, and Stripe Rust Diseases of Wheat. College of Agricultural, Consumer and Environmental Sciences, New Mexico State University, Guide A-415.
McDonald BA and Linde C, (2002). Pathogen population genetics, evolutionary potential, and durable resistance. Annual Review of Phytopathology, 40(1):349-379.
McIntosh AR, (2009). History and status of the wheat rusts. Paper presented at the Proceedings of the 2009 Technical Workshop Borlaug Global Rust Initiative, Cd. Obregon, Sonora, Mexico, March. McIntosh RA, (1985). Genetical strategies for diseases control. In Proc. Australian plant pathology Conference, Univ. Auckland, NZ, 39-44.
Mert Z, Nazari K, Karagöz E, Akan K, Öztürk İ and Tülek A, (2016). First incursion of the warrior race of wheat stripe rust (Puccinia striiformis f. sp. tritici) to Turkey in 2014. Plant Diseases, 100(2):528.
Nagarajan S, Nayar SK, Bahadur P and Kumar J, (1986). Wheat pathology and wheat improvement. Indian Agricultural Research Institute, Regional Station, Flowerdale, Shimla (India), 12pp. Nagarajan S. and Joshi LM, (1980). Further investigations on predicting wheat rust appearance in central and peninsular India. Phytopath. Z, 98: 84-90.
Nagarajan S, Bahadur P and Nayar SK, (1984). Occurrence of a new virulence 47S102 of Puccinia striiformis West. In India during crop year, 1982. Cereal Rusts Bull, 12: 28-31.
Nayar SK, Prashar M and Bhardwaj SC, (1996). Occurrence of Yr9 virulence of yellow rust and its management- An Indian context. Presented in Int. Crop Science Congress, New Delhi, November 17- 24, 1996.
Pandey P, Irulappan V, Bagavathiannan MV and Senthil Kumar M, (2017). Impact of combined abiotic and biotic stresses on plant growth and avenues for crop improvement by exploiting physio morphological traits. Front. Pl. Sci, 8: 537.
Pooja, (2018). Molecular Analysis of Yr genes in Wheat (Triticum aestivum L. Em Thell). Thesis submitted to Chaudhary Charan Singh Haryana Agricultural University Hisar, Haryana. Pooja, Dhanda SS, Pahil VS and Behl RK, (2022). Evaluation of Bread Wheat (Triticum aestivum L.) Genotypes for Yellow Rust Resistance in Relation to Meteorological Parameters. Ekin Journal of Crop Breeding and Genetic, 8(1):53- 60.
Pooja, Dhanda SS, Yadav NR, (2019). Molecular analysis of Yr genes for yellow rust resistance in bread wheat (Triticum aestivum L. Em. Thell). Bangladesh J. of Botany, 48(4): 1199-1206, 2019. Prashar M, Bhardwaj SC, Jain SK and Dutta D, (2007). Pathogenic evolution in Puccinia striiformis in India during 1995-2004. Aust. J. Agric. Res, 58: 602- 604.
Priestly R, (1978) Detection of increased virulence in populations of wheat yellow rust. In: Scott PR, Bainbridge A (eds) Plant disease epidemiology. Oxford, Blackwell Scientific, pp 63–70.
Rahmatov M, (2016). Genetic Characterization of Novel Resistance Alleles to Stem Rust and Stripe Rust in Wheat-Alien Introgression Lines. PhD thesis submitted to Swedish University of Agricultural Sciences, Alnarp Swedon.
Rahmatov, M, Eshonova Z, Ibrogimov A, Otambekova M, Khuseinov B and Muminjanov H, (2012). Monitoring and evaluation of yellow rust for breeding resistant varieties of wheat in Tajikistan, In: Proceedings of the 2nd, 3rd and 4th Regional Conferences on Yellow Rust in the Central and West Asia and North Africa (CWANA) Region, Eds A. Yahyaoui, and S. Rajaram (Alnarp: International Center for Agricultural Research in the Dry Areas).
Rajaram S, Borlaug N, Van Ginkel M, (2002). CIMMYT international wheat breeding. Bread wheat improvement and production. FAO, Rome 103-117.
Randhawa HS, Gaudet DA, Puchalski BJ and Graf R, (2011). New virulence races of stripe rust in Western Canada. Presented at the Ist Canadian Wheat Symposium, Winnipeg, MB, Nov. 30- Dec.2. 165.
Randhawa MS, Bains NS, Sohu VS, Chhuneja P, Trethowan RM, Bariana HS and Bansal U, (2019). Marker Assisted Transfer of Stripe Rust and Stem Rust Resistance Genes into Four Wheat Cultivars. Agronomy, 9(9):497. Rani R, Singh R and Yadav NR, (2019). Evaluating stripe rust resistance in Indian wheat genotypes and breeding lines using molecular markers. Comptes Rendus Biologies, 342:154-174. Rao MV, Naqvi SMA, Luthra JK, (1981). MLKS- 11-A wheat multiline variety for the northern and northwestern plains of India. In: N E Borlaug, Ed. EurekaMag, Accession: 000924011.
Roelfs AP, (1992). Rust diseases of wheat: concepts and methods of disease management. CIMMYT. Saari EE and Prescott J, (1985). World distribution in relation to economic losses. In: Diseases, Distribution, Epidemiology and Control, pp 259-298.
Sanders R, (2018). Strategies to reduce the emerging wheat stripe rust disease. Aleppo, Syria: International Center for Agricultural Research in the Dry Areas (ICARDA).
Schwessinger B, Chen YJ, Tien R, Vogt JK and Sperschneider J, (2020). Distinct life histories impact dikaryotic genome evolution in the rust fungus Puccinia striiformis causing stripe rust in wheat. Genome Biol Evol, 12:597–617.
Sharma I, (2012). Diseases in wheat crops-an introduction. In: Disease resistance in wheat India, Ed. Indu Sharma. India, Cabi, 1-17.
Sharma R, Nazari K, Amanov A, Ziyaev Z and Jalilov A, (2016). Reduction of winter wheat yield losses caused by stripe rust through fungicide management. Journal of Phytopathology, 164:671-677.
Sharma S, Duveiller E, Karki CB, Thapa DB, Sharma RC and Joshi AK, (2015). Wheat Stripe Rust Virulence and Varietal Resistance in the Foot Hill Himalayas of Nepal. Journal of Agricultural Science and Technology, B 5, 477-485.
Sharma SK, Joshi LM, Singh SD and Nagarajan S, (1972). New virulence of yellow rust of Kalyansona variety of wheat. Proc. Second Eur. Alled. Cer. Rusts Conf., Prague, 263-265.
Simmonds NW, (1985). A plant breeder’s perspective of durable resistance. FAO Plant Protection Bull, 33: 13-17.
Singh R, Mahmoud pour A, Rajkumar M and Narayana R, (2017). A review on stripe rust of wheat, its spread, identification and management at field level. Research on Crops, 18(3):528-533.
Singh RP, William HM, Huerta-Espino JRosewarne G, (2004). Wheat rust in Asia: meeting the challenges with old and new technologies. In: Proceedings of the 4th International Crop Science Congress, Brisbane, Australia.
Singh, RP, and Trethowan R, (2007). Breeding spring bread wheat for irrigated and rainfed production system of developing world. In: Breeding major food staples, Eds. M. Kang and P.M. Priyadarshan. Blackwell Publishing Iowa, USA, 1 pp 109–140. doi: 10.1002/9780470376447.ch5.
Sørensen CK, (2012). Infection biology and aggressiveness of Puccinia striiformis on resistant and susceptible wheat. PhD Thesis University of Aarhus., Denmark, Nordre Ringgade, Aarhus.
Stoa TE, (1945). A brief history of wheat variety changes on farms in North Dacota. Bi-monthly Bull, 7 (6), 21-26.
Surico G, (2013). The concepts of plant pathogenicity, virulence/avirulence and effector proteins by a teacher of plant pathology. Phytopathologia Mediterranean, 399-417.
Thach T, Ali S, de Vallavieille-Pope C, Justesen AF and Hovmøller MS, (2016). Worldwide population structure of the wheat rust fungus Puccinia striiformis in the past. Fungal Genetics and Biology, 87:1-8.
Vander Plank, (1963). Plant diseases- Epidemics and Control. Academic Press London, pp349.
Vander Plank J, (1969). Pathogenic races, host resistance, and an analysis of pathogenicity. Netherlands Journal of Plant Pathology, 75(1- 2):45-52.
Walkowiak S, Gao L, Monat C, Haberer G and Kassa MT, (2020). Multiple wheat genomes reveal global variation in modern breeding. Nature 588:277–283.