Üriner Mikrobiyota

Uzun yıllardan beri steril kabul edilen üriner sistemin yapılan çalışmalarda aslında bağırsaklar ve cilt gibi bir floraya sahip olabi- leceği gündeme gelmiştir. Üriner sistem mik- robiyotasının varlığı üzerine yapılan çalış- malar sonucunda bazı ürolojik hastalıkların tedavisinde probiyotiklerin ve prebiyotiklerin kullanılıp kullanılamayacağı sorgulanmakta- dır. Biz bu derlememizde üriner mikrobiyo- ta ve hastalıklarla olan ilişkilerini derlemeyi amaçladık.

Urinary Microbiome

The urinary system is thought to be ste- rile for many years, has come to an end with recent studies that may actually have a flora like intestines and skin. As a result of studies on the presence of microbiota in the urinary system, it is questioned whether probiotics and prebiotics can be used in the treatment of some urological diseases. In this review we ai- med to evaluate the relations between urinary microbiome and the diseases.

___

  • 1. Aragón IM, Herrera-Imbroda B, Queipo-Ortuño MI, Cas- tillo E, Del Moral JS, Gómez-Millán J, Yucel G, Lara MF. The Urinary Tract Microbiome in Health and Disease. Eur Urol Focus. 2016 Nov 14. pii: S2405-4569(16)30159-6.
  • 2. Karakan T, Tahtaci M, Alagozlu H. Probiotics: should we be more definitive in terminology? Eur J Gastroenterol He- patol 2012;24:1115-6.
  • 3. Alfano M, Canducci F, Nebuloni M, Clementi M, Montor - si F, Salonia A. The interplay of extracellular matrix and microbiome in urothelial bladder cancer. Nat Rev Urol 2016;13:77-90.
  • 4. Aagaard K, Ma J, Antony KM, Ganu R, Petrosino J, Ver - salovic J. The placenta harbors a unique microbiome. Sci Transl Med. 2014 May 21;6(237):237ra65.
  • 5. Branton WG, Ellestad KK, Maingat F, Wheatley BM, Rud E, Warren RL, Holt RA, Surette MG, Power C. Brain mic- robial populations in HIV/AIDS: α-proteobacteria pre- dominate independent of host immune status. PLoS One. 2013;8(1):e54673.
  • 6. Thomas-White K, Brady M, Wolfe AJ, Mueller ER. The bladder is not sterile: History and current discoveries on the urinary microbiome. Curr Bladder Dysfunct Rep 2016;11:18-24.
  • 7. Karakan T, Ergun M, Dogan I, Cindoruk M, Unal S. Com - parison of early enteral nutrition in severe acute pancrea - titis with prebiotic fiber supplementation versus standard enteral solution: a prospective randomized double-blind study. World J Gastroenterol. 2007 May 21;13(19):2733-7.
  • 8. NIH HMP Working Group, Peterson J, Garges S, Giovan - ni M, McInnes P, Wang L, Schloss JA, Bonazzi V, McE - wen JE, Wetterstrand KA, Deal C, Baker CC, Di Frances - co V, Howcroft TK, Karp RW, Lunsford RD, Wellington CR, Belachew T, Wright M, Giblin C, David H, Mills M, Salomon R, Mullins C, Akolkar B, Begg L, Davis C, Gran - dison L, Humble M, Khalsa J, Little AR, Peavy H, Pontzer C, Portnoy M, Sayre MH, Starke-Reed P, Zakhari S, Read J, Watson B, Guyer M. The NIH Human Microbiome Project. Genome Res 2009;19:2317-23.
  • 9. Lewis DA, Brown R, Williams J, White P, Jacobson SK, Marchesi JR, Drake MJ. The human urinary microbiome; bacterial DNA in voided urine of asymptomatic adults. Front Cell Infect Microbiol. 2013 Aug 15;3:41.
  • 10. Hilt EE, McKinley K, Pearce MM, Rosenfeld AB, Zilliox MJ, Mueller ER, Brubaker L, Gai X, Wolfe AJ, Schrecken- berger PC. Urine is not sterile: use of enhanced urine cultu- re techniques to detect resident bacterial flora in the adult female bladder. J Clin Microbiol 2014;52:871-6.
  • 11. Pearce MM, Zilliox MJ, Rosenfeld AB, Thomas-White KJ, Richter HE, Nager CW, Visco AG, Nygaard IE, Barber MD, Schaffer J, Moalli P, Sung VW, Smith AL, Rogers R, Nolen TL, Wallace D, Meikle SF, Gai X, Wolfe AJ, Brubaker L; Pelvic Floor Disorders Network. The female urinary micro- biome in urgency urinary incontinence. Am J Obstet Gyne- col 2015 Sep;213(3):347.e1-11.
  • 12. Siddiqui H, Nederbragt AJ, Lagesen K, Jeansson SL, Jakob- sen KS. Assessing diversity of the female urine microbiota by high throughput sequencing of 16S rDNA amplicons. BMC Microbiol 2011 Nov 2;11:244.
  • 13. Fouts DE, Pieper R, Szpakowski S, Pohl H, Knoblach S, Suh MJ, Huang ST, Ljungberg I, Sprague BM, Lucas SK, Tor- ralba M, Nelson KE, Groah SL. Integrated next-generation sequencing of 16S rDNA and metaproteomics differentiate the healthy urine microbiome from asymptomatic bacte- riuria in neuropathic bladder associated with spinal cord injury. J Transl Med 2012 Aug 28;10:174.
  • 14. Nelson DE, Dong Q, Van der Pol B, Toh E, Fan B, Katz BP, Mi D, Rong R, Weinstock GM, Sodergren E, Fortenberry JD. Bacterial communities of the coronal sulcus and distal urethra of adolescent males. PLoS One 2012;7:e36298.
  • 15. Brubaker L, Wolfe AJ. The new world of the urinary mic - robiota in women. Am J Obstet Gynecol 2015;213:644-9.
  • 16. Horwitz D, et al. Decreased microbiota diversity associated with urinary tract infection in a trial of bacterial interferen- ce. J Inf Secur 2015;71:358–67.
  • 17. Trautner BW, Hull RA, Darouiche RO. Colicins prevent colonization of urinary catheters. J Antimicrob Chemother 2005;56:413-5.
  • 18. Darouiche RO, Thornby JI, Cerra-Stewart C, Donovan WH, Hull RA. Bacterial interference for prevention of uri - nary tract infection: a prospective, randomized, placebo- controlled, double-blind pilot trial. Clin Infect Dis 2005 Nov 15;41:1531-4.
  • 19. Cadieux PA, Burton J, Devillard E, Reid G. Lactobacillus by-products inhibit the growth and virulence of uropat - hogenic Escherichia coli. J Physiol Pharmacol 2009 Dec;60 Suppl 6:13-8.
  • 20. Chapman CM, Gibson GR, Rowland I. Effects of single- and multi-strain probiotics on biofilm formation and in vitro adhesion to bladder cells by urinary tract pathogens. Anaerobe 2014;27:71-6.
  • 21. Chromek M, Slamová Z, Bergman P, Kovács L, Podracká L, Ehrén I, Hökfelt T, Gudmundsson GH, Gallo RL, Ager - berth B, Brauner A. The antimicrobial peptide cathelicidin protects the urinary tract against invasive bacterial infecti- on. Nat Med 2006 Jun;12:636-41.
  • 22. Morrison G, Kilanowski F, Davidson D, Dorin J. Characte- rization of the Mouse beta defensin 1, Defb1, mutant mouse model. Infect Immun. 2002 Jun;70(6):3053-60.
  • 23. Groah SL, Pérez-Losada M, Caldovic L, Ljungberg IH, Sprague BM, Castro-Nallar E, Chandel NJ, Hsieh MH, Pohl HG. Redefining Healthy Urine: A Cross-Sectional Exploratory Metagenomic Study of People With and Wit - hout Bladder Dysfunction. J Urol 2016 Aug;196:579-87.
  • 24. Trautner BW, Hull RA, Thornby JI, Darouiche RO. Coating urinary catheters with an avirulent strain of Escherichia coli as a means to establish asymptomatic colonization. Infect Control Hosp Epidemiol. 2007 Jan;28:92-4.
  • 25. Darouiche RO, Green BG, Donovan WH, Chen D, Schwartz M, Merritt J, Mendez M, Hull RA. Multicenter randomized controlled trial of bacterial interference for prevention of urinary tract infection in patients with neurogenic bladder. Urology. 2011 Aug;7:341-6.
  • 26. Guay DR. Cranberry and urinary tract infections. Drugs 2009;69:775-807.
  • 27. Foxman B, Cronenwett AE, Spino C, Berger MB, Morgan DM. Cranberry juice capsules and urinary tract infection after surgery: results of a randomized trial. Am J Obstet Gynecol. 2015 Aug;213:194.e1-8.
  • 28. Domenici L, Monti M, Bracchi C, Giorgini M, Colagiovan- ni V, Muzii L, Benedetti Panici P. D-mannose: a promising support for acute urinary tract infections in women. A pilot study. Eur Rev Med Pharmacol Sci 2016 Jul;20:2920-5 . 29. Hashim H, Abrams P. Is the bladder a reliable witness for predicting detrusor overactivity? J Urol 2006 Jan;175:191-4; discussion 194-5.
  • 30. Sorrentino F, Cartwright R, Digesu GA, Tolton L, Franklin L, Singh A, Greco P, Khullar V. Associations between in - dividual lower urinary tract symptoms and bacteriuria in random urine samples in women. Neurourol Urodyn 2015 Jun;34:429-33.
  • 31. Karstens L, Asquith M, Davin S, Stauffer P, Fair D, Gre - gory WT, Rosenbaum JT, McWeeney SK, Nardos R. Does the Urinary Microbiome Play a Role in Urgency Urinary Incontinence and Its Severity? Front Cell Infect Microbiol 2016 Jul 27;6:78.
  • 32. Thomas-White KJ, Hilt EE, Fok C, Pearce MM, Mueller ER, Kliethermes S, Jacobs K, Zilliox MJ, Brincat C, Price TK, Kuffel G, Schreckenberger P, Gai X, Brubaker L, Wolfe AJ. Incontinence medication response relates to the female urinary microbiota. Int Urogynecol J 2016 May;27:723-33.
  • 33. Broomfield RJ, Morgan SD, Khan A, Stickler DJ. Crystalli - ne bacterial biofilm formation on urinary catheters by ure - ase-producing urinary tract pathogens: a simple method of control. J Med Microbiol 2009 Oct;58(Pt 10):1367-75.
  • 34. Wang X, Krambeck AE, Williams JC Jr, Tang X, Rule AD, Zhao F, Bergstralh E, Haskic Z, Edeh S, Holmes DR 3rd, Herrera Hernandez LP, Lieske JC. Distinguishing charac - teristics of idiopathic calcium oxalate kidney stone formers with low amounts of Randall’s plaque. Clin J Am Soc Neph- rol 2014 Oct 7;9:1757-63.
  • 35. Tavichakorntrakool R, Prasongwattana V, Sungkeeree S, Saisud P, Sribenjalux P, Pimratana C, Bovornpadungkitti S, Sriboonlue P, Thongboonkerd V. Extensive characteri - zations of bacteria isolated from catheterized urine and sto- ne matrices in patients with nephrolithiasis. Nephrol Dial Transplant. 2012 Nov;27:4125-30.
  • 36. Barr-Beare E, Saxena V, Hilt EE, Thomas-White K, Schober M, Li B, Becknell B, Hains DS, Wolfe AJ, Schwaderer AL. The Interaction between Enterobacteriaceae and Calcium Oxalate Deposits. PLoS One 2015 Oct 8;10:e0139575.
  • 37. Knight J, Deora R, Assimos DG, Holmes RP. The genetic composition of Oxalobacter formigenes and its relationship to colonization and calcium oxalate stone disease. Urolithi- asis 2013;41:187-96.
  • 38. Siener R, Bangen U, Sidhu H, Hönow R, von Unruh G, Hes- se A. The role of Oxalobacter formigenes colonization in calcium oxalate stone disease. Kidney Int 2013;83:1144-9.
  • 39. Siener R, Bangen U, Sidhu H, Hönow R, von Unruh G, Hes- se A. The role of Oxalobacter formigenes colonization in calcium oxalate stone disease. Kidney Int 2013;83:1144-9.
  • 40. Hatch M, Cornelius J, Allison M, Sidhu H, Peck A, Fre - el RW. Oxalobacter sp. reduces urinary oxalate excreti - on by promoting enteric oxalate secretion. Kidney Int 2006;69:691-8.
  • 41. Duncan SH, Richardson AJ, Kaul P, Holmes RP, Allison MJ, Stewart CS. Oxalobacter formigenes and its potential role in human health. Appl Environ Microbiol 2002;68:3841-7.
  • 42. Milliner D, Hoppe B, Groothoff J. A randomised Phase II/ III study to evaluate the efficacy and safety of orally admi - nistered Oxalobacter formigenes to treat primary hypero - xaluria. Urolithiasis 2017 Jul 17.
  • 43. Miller AW, Dale C, Dearing MD. The Induction of Oxala - te Metabolism In Vivo Is More Effective with Functional Microbial Communities than with Functional Microbial Species. mSystems 2017 Sep 26;2(5).
  • 44. Mittal RD, Kumar R, Bid HK, Mittal B. Effect of antibiotics on Oxalobacter formigenes colonization of human gastro - intestinal tract. J Endourol 2005;19:102-6.
  • 45. Lange JN, Wood KD, Wong H, Otto R, Mufarrij PW, Knight J, Akpinar H, Holmes RP, Assimos DG. Sensitivity of human strains of Oxalobacter formigenes to commonly prescribed antibiotics. Urology 2012;79:1286-9.
  • 46. Aso, Y. & Akazan, H. Prophylactic effect of a Lactobacillus casei preparation on the recurrence of superfi cial bladder cancer. BLP Study Group. Urol. Int 1992;49:125-29.
Yeni Üroloji Dergisi-Cover
  • ISSN: 1305-2489
  • Yayın Aralığı: Yılda 3 Sayı
  • Başlangıç: 2005
  • Yayıncı: Avrasya Üroonkoloji Derneği
Sayıdaki Diğer Makaleler

Testiküler Damarlar Arası Arteriyovenöz Anastomoz; Olgu Sunumu

Ediz Caner, Ediz Suna Sahin, Yilmaz Omer, Temel Muhammed Cihan

Fournier Gangreni Tedavisinde Vakum Yardımlı Kapama ve Konvansiyonel Pansumanın Karşılaştırılması

Fuat Kızılay, Emir Akıncıoğlu, Bülent Semerci, Barış Altay

Use of Flexible Cystoscope in Removal of Stone in Laparoscopic Pyeloplasty and Pyelolithotomy

Alper Bitkin, Mustafa Aydın, Ebubekir Akgüneş, Mevlüt Keleş, Mustafa Kemal Atilla, Lokman Irkilata

Masif İnguinoskrotal Mesane Herniasyonu: 3 Olgu Serisi ve Literatürün Gözden Geçirilmesi

Gürdal İnal, Ekrem Güner, Yusuf Arıkan, Osman Özdemir, Kamil Gökhan Şeker, Ulaş Sözener, Volkan Tuğcu

Dondurulmuş Ejekülat ve Dondurulmuş Testiküler Spermin Sonuçlarının İntrasitoplazmik Sperm Enjeksiyonu (ICSI) Parametrelerine Etkisinin Değerlendirilmesi

Seda Karabulut, Oya Korkmaz, Yusuf Sağıroğlu, İlknur Keskin

Üriner Sistem Taş Hastalarında Çoklu İlaca Dirençli Enfeksiyon Oranları

Erbay Tümer, Hakan Erçil, Mehmet Eflatun Deniz, Güçlü Gürlen, Umut Ünal, Ergün Alma, Zafer Gökhan Gürbüz, Yalçın Evliyaoğlu

Saç Beyazlama ve Saç Kaybı Skorları ile Erektil Disfonksiyon Arasındaki İlişki

Süleyman Bulut, Binhan Kağan Aktaş, Çetin Volkan Öztekin, Süleyman Tağcı, Cüneyt Özden, Ali Memiş

Böbrek Taşı Olan Çocuklarda Önceki Taş Tedavisinin Perkütan Nefrolitotomi Sonuçlarına Etkisi

Ömer Faruk Bozkurt, Ali Ünsal, Çağrı Şenocak, Erkan Sadioğlu, Rıdvan Özbek, Selçuk Sarıkaya

Türk Üroloji Dergisinde Mart 2007 ve Aralık 2013 Tarihleri arasında Yayımlanan Makalelerin Atıf Analizlerinin Değerlendirilmesi

Mustafa Zafer Temiz, Zulfu Sertkaya

Laparoskopik Pyeloplasti Ve Pyelolitotomi Operasyonlarında Taş Çıkarılmasında Fleksible Sistoskop Kullanımı

Alper BİTKİN, Mustafa AYDİN, Ebubekir AKGUNES, Mevlut KELES, Mustafa Kemal ATİLLA, Lokman IRKİLATA