Classification of digital dermatitis with image processing and machine learning methods

Classification of digital dermatitis with image processing and machine learning methods

In this study, it was aimed to perform the detection and grading of Digital Dermatitis (DD) disease, which is common in dairy cattle and causes serious economic losses, using artificial intelligence techniques in a computer environment with high accuracy without the need for any expert intervention. Within the scope of the study, because of the examinations performed on 168 cows of Holstein breed, aged 4-7 years, whose lameness was detected in dairy farms located in the center and districts of Burdur region, pictures of lesions due to DD were taken, and 4 groups were formed according to the degree of size. The photographs obtained were first labelled according to the degree of disease by a faculty member specialized in podiatry. Afterwards, the tagged photographs were reproduced using artificial intelligence image augmentation techniques, and a sample of 1,000 datasets was carried out for each disease degree. The photographs that make up the dataset were processed using the inception v3 deep learning algorithm and more than 2,000 numerical features were extracted. Then, machine learning models were developed using 6 different machine learning algorithms to classify these features. The results obtained were examined in detail with the help of tables and graphics, and it showed that the developed artificial intelligence models could be used in the classification of DD case photos with a cumulative accuracy value above 0.87.

___

  • Bassett, D.R., Toth, L.P., LaMunion, S.R., Crouter, S.E. (2017). Step Counting: A Review of Measurement Considerations and Health-Related Applications. Sports Med. 47, 1303–1315. https://doi.org/10.1007/s40279-016-0663-1
  • Biemans, F., Bijma, P., Boots, N., De Jong, M. (2017). Digital Dermatitis in dairy cattle: The contribution of different disease classes to transmission. Epidemics 23. https://doi.org/10.1016/j.epidem.2017.12.007
  • Bruijnis, M.R.N., Beerda, B., Hogeveen, H., Stassen, E.N. (2012). Assessing the welfare impact of foot disorders in dairy cattle by a modeling approach. Animal 6, 962–970. https://doi.org/10.1017/S1751731111002606
  • Cha, E., Hertl, J.A., Bar, D., Gröhn, Y.T. (2010). The cost of different types of lameness in dairy cows calculated by dynamic programming. Prev. Vet. Med. 97, 1–8. https://doi.org/10.1016/j.prevetmed.2010.07.011
  • Clegg, S.R., Mansfield, K.G., Newbrook, K., Sullivan, L.E., Blowey, R.W., Carter, S.D., Evans, N.J. (2015). Isolation of digital dermatitis treponemes from hoof lesions in Wild North American Elk (Cervus elaphus) in Washington State, USA. J. Clin. Microbiol. 53, 88–94. https://doi.org/10.1128/JCM.02276-14
  • Demirkan, I., Murray, R., Carter, S. (2000). Skin diseases of the bovine digit associated with lameness. Vet Bull 70, 149–171.
  • Döpfer, D., Koopmans, A., Meijer, F.A., Szakáll, I., Schukken, Y.H., Klee, W., Bosma, R.B., Cornelisse, J.L., van Asten, A.J., ter Huurne, A.A. (1997). Histological and bacteriological evaluation of digital dermatitis in cattle, with special reference to spirochaetes and Campylobacter faecalis. Vet. Rec. 140, 620–623. https://doi.org/10.1136/vr.140.24.620
  • Garbarino, E.J., Hernandez, J.A., Shearer, J.K., Risco, C.A., Thatcher, W.W. (2004). Effect of lameness on ovarian activity in postpartum holstein cows. J. Dairy Sci. 87, 4123–4131. https://doi.org/10.3168/jds.S0022-0302(04)73555-9
  • Hernandez, J., Shearer, J.K., Webb, D.W. (2001). Effect of lameness on the calving-to-conception interval in dairy cows. J. Am. Vet. Med. Assoc. 218, 1611–1614. https://doi.org/10.2460/javma.2001.218.1611
  • Hesseling, J., Legione, A.R., Stevenson, M.A., McCowan, C.I., Pyman, M.F., Finochio, C., Nguyen, D., Roic, C.L., Thiris, O.L., Zhang, A.J., van Schaik, G., Coombe, J.E. (2019). Bovine digital dermatitis in Victoria, Australia. Aust. Vet. J. 97, 404–413. https://doi.org/10.1111/avj.12859
  • Holzhauer, M., Bartels, C.J.M., Döpfer, D., Schaik, G. Van. (2008). Clinical course of digital dermatitis lesions in an endemically infected herd without preventive herd strategies. Vet. J. 177, 222–230. https://doi.org/10.1016/j.tvjl.2007.05.004
  • Losinger, W.C. (2006). Economic impacts of reduced milk production associated with papillomatous digital dermatitis in dairy cows in the USA. J. Dairy Res. 73, 244–256. https://doi.org/10.1017/S0022029906001798
  • Sogstad, A.M., Fjeldaas, T., Østerås, O., Forshell, K.P. (2005). Prevalence of claw lesions in Norwegian dairy cattle housed in tie stalls and free stalls. Prev. Vet. Med. 70, 191–209. https://doi.org/10.1016/j.prevetmed.2005.03.005
  • Trott, D.J., Moeller, M.R., Zuerner, R.L., Goff, J.P., Waters, W.R., Alt, D.P., Walker, R.L., Wannemuehler, M.J. (2003). Characterization of Treponema phagedenis-Like Spirochetes Isolated from Papillomatous Digital Dermatitis Lesions in Dairy Cattle. J. Clin. Microbiol.
Veterinary Journal of Mehmet Akif Ersoy University-Cover
  • Başlangıç: 2016
  • Yayıncı: Burdur Mehmet Akif Ersoy Üniversitesi
Sayıdaki Diğer Makaleler

Analysis and Estimation of Pathological Data and Findings with Deep Learning Methods

Ahmet Anıl ŞAKIR, Ali Hakan IŞIK, Özlem ÖZMEN, Volkan İPEK

Investigation of serum leptin, ghrelin, irisin, insulin levels and their correlations in cattle with subclinical ketosis

Hale ERGİN EĞRİTAĞ, Oğuz MERHAN, Kadir BOZUKLUHAN, Kemal VAROL, Türker ATCALI

The effects of safranal against bisphenol AF on some reproductive parameters in male new zealand rabbits

Muhammed ETYEMEZ, Mehmet Şükrü GÜLAY

Effects of selenium, vitamin E, and β-carotene administration on fertility of Awassi ewes synchronized for estrus in non-breeding season

Enver ÖZAR, Mustafa Kemal SARIBAY, Ayşe Merve KÖSE, Ramazan SERTKOL

The effect of organic matter based decontamination technique on E. coli inhibition in shrimp

Halil YALÇIN, Zübeyde POLAT

Classification of digital dermatitis with image processing and machine learning methods

Kürşad YİĞİTARSLAN, İsmail KIRBAŞ

Investigation of plasma pepsinogen level in calves with abomasal distention

Nuri MAMAK, Ramazan YILDIZ, Halil İbrahim GÖKÇE, Türker ATCALI

Determination of antibiotic resistance and biofilm formation in Klebsiella strains isolated from bovine mastitis cases

Mevlüt ATALAY, Uçkun Sait UÇAN

Nutrient profile, digestibility, and feeding value of common vetch (Vicia sativa) alone or intercropping with different forages

Eren KUTER

An optimized protocol for the electroporation of NCI H929 multiple myeloma cells

Ayşe KIZILYER