MtDNA D-loop genetic diversity of common quail (Coturnix coturnix) through Ukraine and Spain

MtDNA D-loop genetic diversity of common quail (Coturnix coturnix) through Ukraine and Spain

Populations of common quail (Coturnix coturnix) have recently been declining in Europe. This is the first study of common quail in eastern Europe using molecular markers. The mtDNA D-loop genetic diversity of common quails migrating through Ukraine was analyzed and compared with that of birds migrating via northern Spain in 2017-2018. In samples from 77 birds, 32 polymorphic sites and 30 haplotypes (111-1130) were identified, only 4 of which were common for birds sampled in both Ukraine and Spain. Phylogenetic analysis indicated 2 well-supported clades. Found were 3 haplotypes clustered in 1 phylogenetic dads only in common quails sampled in Ukraine. The results can be used for the identification of different flyways, particularly for common quails of eastern European origin.

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  • Aljanabi SM, Martinez I (1997). Universal and rapid salt-extraction of high quality genomic DNA for PCR-based techniques. Nucleic Acids Research 25: 4692-4693. doi: 10.1093/nar/25.22.4692
  • BirdLife International (2018). The BirdLife checklist of the birds of the world: Version 8.
  • Butkauskas D, Švažas S, Bea A, Prakas P, Olano I et al. (2019). Designation of flyways and genetic structure of Woodpigeon Columba palumbus in Europe and Morocco. European Journal of Wildlife Research 65: 91. doi: 10.1007/s10344-019-1336-9
  • Chazara O, Minvielle F, Roux D, Bed’hom B, Feve K et al. (2010). Evidence for introgressive hybridization of wild common quail (Coturnix coturnix) by domesticated Japanese quail (Coturnix japonica) in France. Conservation Genetics 11: 1051-1062. doi: 10.1007/s10592-009-9951-8
  • Cramp S, Simmons K (1980). The birds of the Western Palearctic, Vol. II: hawks to bustards. Oxford, UK: Oxford University Press.
  • Excoffier L, Laval G, Schneider S (2005). Arlequin version 3.0, An integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online 1: 47-50. doi: 10.1177/117693430500100003
  • Hewitt GM (2001). Speciation, hybrid zones and phylogeography or seeing genes in space and time. Molecular Ecology 10: 537-549. doi: 10.1046/j.1365-294x.2001.01202.x
  • Kraus R, Zeddeman A, Hooft P, Sartakov D, Soloviev S et al. (2011). Evolution and connectivity in the world-wide migration system of the mallard: inferences from mitochondrial DNA. BMC Genetics 12: 99. doi: 10.1186/1471-2156-12-99
  • Kumar S, Stecher G, Li M, Knyaz C, Tamura K (2018). MEGA X: molecular evolutionary genetics analysis across computing platforms. Molecular Biology and Evolution 35: 1547-1549. doi: 10.1093/molbev/msy096
  • Morris KM, Hindle MM, Boitard S, Burt DM, Danner AF et al. (2020). The quail genome: insights into social behaviour, seasonal biology and infectious disease response. BMC Biology 18:14. doi: 10.1186/s12915-020-0743-4
  • Nankinov D (1982). Common Quail. Migrations of birds of Eastern Europe and Northern Asia. Falkoniformes-Gruiformes. Moscow, Russia: Nauka (in Russian).
  • Perennou C (2009). European Union Management Plan 2009–2011. Common Quail, Coturnix coturnix. Technical Report, 2009– 032.Brussels, Belgium: European Commission.
  • Sanchez-Donoso I, Vila C, Puigcerver M, Butkauskas D, Caballero de la Calle JR et al. (2012). Are farm-reared Quails for game restocking really Common Quails (Coturnix coturnix)?: a genetic approach. PLoS One 7(6): e39031.
  • Sanchez-Donoso I, Rodríguez Teijeiro JD, Quintanilla I, JiménezBlasco I, Sardà-Palomera F et al. (2014). Influence of game restocking on the migratory behaviour of the common quail, Coturnix coturnix. Evolutionary Ecology Research 16: 493-504. doi: 10.7818/ECOS.2013.22-2.08
  • Smith S, Fusani L, Boglarka B, Sanchez-Donoso I, Marasco V (2018). Lack of introgression of Japanese quail in a captive population of common quail. European Journal of Wildlife Research 64: 51 doi: 10.1007/s10344-018-1209-7
  • Wilson R, Ely C, Talbot S (2018). Flyway structure in the circumpolar greater white-fronted goose. Ecology and Evolution 8: 8490- 8507. doi: 10.1002/ece3.4345
  • Yanenko V, Serebryakov V (2015). Ecological features of populations of Common Quail (Coturnix coturnix) in Ukraine (numbers, distribution, migration, protection). Vinnitsa, Ukraine: NilanLTD (In Ukrainian)