GENETIC VARIABILITY AND DIVERSITY OF UPLAND RICE LANDRACES

GENETIC VARIABILITY AND DIVERSITY OF UPLAND RICE LANDRACES

Genetic variability and diversity studies provide important data for plant breeders who manage breeding programs. Forty-three upland rice genotypes collected in Thailand were assessed genetic variability using randomized complete block designs with three replications in two years at the Faculty of Natural Resources, Prince of Songkla University. The eight characterized quantitative traits showed significant variations by genotypes. For the interaction genotype×year, significance was found in days to maturity, plant height, number of tillers hill-1, yield, and 1,000 seed weight. High genetic coefficients of variation were observed for days to flowering, plant height, number of tillers hill-1, 1,000 seed weight, and seed width. High broad-sense heritability was found for days to flowering, days to maturity, plant height, number of tillers hill-1, 1,000 seed weight, and seed width. Cluster analysis grouped the 43 genotypes into eight groups based on SSR markers at 0.752 similarity level. These results expose the broad variability and assist rice breeders in selecting the appropriate genotypes for future breeding programs.

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  • Ahmad, F., M.M. Hanafi, M.A. Hakim, M.Y. Rafii, I.W. Arolu and S.N.A. Abdullah. 2015. Genetic divergence and heritability of 42 colored upland rice genotypes (Oryza sativa) as revealed by microsatellites marker and agro-morphological traits. PLOS One 10:1-18.
  • Banterng, P. and A. Joralee. 2015. Evaluation of black glutinous rice genotypes for stability of gamma oryzanol and yield in tropical environments. Turk. J. Field Crops 20:142-149.
  • Bernado, R. 2002. Breeding for Quantitative Traits in Plants. Minnesota:Stemma Press.
  • Botstein D. R.L., White, M. Skolnick and R.W. Davis. 1980. Construction of a genetic linkage map in man using restriction fragment length polymorphisms. Am. J. Hum. Genet. 32:314-331.
  • Chuchert, S., C. Nualsri, N. Junsawang and W. Soonsuwon. 2018. Genetic diversity, genetic variability, and path analysis for yield and its components in indigenous upland rice (Oryza sativa L. var. glutinosa). Songklanakarin J. Sci. Technol. 40:609-616.
  • Dellporta, S.L., J. Wood and J.B. Hicks. 1983. A plant DNA minipreparation: Version ІІ. Plant Mol. Biol. Rep. 1:19-21.
  • Food and Agriculture Organization (FAO). 2020. The State of Food Security and Nutrition in the World. Rome:FAO.
  • Gomez, K.A. and A.A. Gomez. 1984. Statistical Procedures for Agricultural Research. New York:John Wiley & Sons Inc.
  • Gonzaga, Z.J., K. Aslam, E.M. Septiningsih and B.C.Y. Collard. 2015. Evaluation of SSR and SNP markers for molecular breeding in rice. Plant Breed. Biotech. 3:139-152.
  • Gramene. 2021. Panel of 50 standard SSR markers, https://archive.gramene.org/markers/microsat/50_ssr.html, (Accessed Sept 1, 2021)
  • Kamara, N., M.D. Asante, R. Akromah and C.S. Kamara. 2017. Genetic analysis of yield and yield components in Oryza sativa x Oryza sativa cross. Afr. Crop Sci. J. 25:539-550.
  • Khan, F. 2015. Molecular markers: An excellent tool for genetic analysis. J. Mol. Biomark. Diagn. 6:233, doi:10.4172/2155-9929.1000233. Luangmanee, J. P. Banterng and A. Wongcharoen. 2016. Blast disease of black glutinous rice germplasms under inoculation at seeding and tillering stages. Turk. J. Field Crops 21:131-138.
  • McCouch, S.R., L. Teytelman, Y. Xu, K.B. Lobos, K. Clare, M. Walton, B. Fu, R. Maghirang, Z. Li, Y. Xing, Q. Zhang, I. Kono, M. Yano, R. Fjellstrom, G. DeClerck, D. Schneider, S. Cartinhour, D. Ware and L. Stein. 2002. Development and mapping of 2240 new SSR markers for rice (Oryza sativa L.) (supplement). DNA Res. 9:257-279.
  • Mendiburu, F.D and R. Simon. 2007. Agricolae - a free statistical library for agricultural research. Iowa:Iowa State University.
  • Nilthong, S., E. Chukeatirote and R. Nilthong. 2020. Assessment of genetic diversity in Thai upland rice varieties using SSR markers. Aust. J. Crop Sci. 14:597-604.
  • Park, J.R., W.T. Yang, Y.S. Kwon, H.N. Kim, K.M. Kim and D.H. Kim. 2019. Assessment of the genetic diversity of rice germplasms characterized by black-purple and red pericarp color using simple sequence repeat markers. Plants 8: 47, doi:10.3390/plants8110471.
  • Pathaichindachote, W., N. Panyawut, K. Sikaewtung, S. Patarapuwadol and A. Muangprom. 2019. Genetic diversity and allelic frequency of selected Thai and exotic rice germplasm using SSR markers. Rice Sci. 26:393-403.
  • Powell, W., G.C. Machray and J. Provan. 1996. Polymorphism revealed by simple sequence repeats. Trend Plant Sci. 1:215-222.
  • Rao, A.N., S.P. Wani, M.S. Ramesha and J.K. Ladha. 2017. Rice Production Systems. In: Rice production worldwide, ed. Chauhan, B.S. Jabran, K. and Mahajan, G., 185-205.. Aktiengesellschaft:Springer International Publishing.
  • Rashmi, D., P. Bisen, S. Saha, B. Loitongbam, S. Singh, Pallavi and P.K. Singh. 2017. Genetic diversity analysis in rice (Oryza sativa L.) accessions using SSR markers. Int. J. Agric. Environ. Biotechnol. 10:1-11.
  • Robinson, H.F., R.E. Comstock and P.H. Harvey. 1951. Genotypic and phenotypic correlations in corn and their implications in selection. Agron. J. 43:282-287.
  • Rohlf, F.J. 2002. NTSYS-Pc, Numerical Taxonomy and Multivariate Analysis System, Version 2.1. New York:Applied Biostatistics.
  • Surek, H. and N. Beser. 2003. Selection for grain yield and yield components in early generations for temperate rice. Philipp. J. Crop. Sci. 28:3-15.
  • Zhan, Q., L. Zhou, N. Bi, H. Wu, J. Li, J. Lu and P. Lin. 2012. A comprehensive analysis of genetic diversity and relationships of 13 sweet sorghum varieties as energy sources. J. Sustain. Bioeng. Syst. 2:86-91.
Turkish Journal Of Field Crops-Cover
  • ISSN: 1301-1111
  • Yayın Aralığı: Yılda 2 Sayı
  • Başlangıç: 1996
  • Yayıncı: Tarla Bitkileri Bilimi Derneği
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