Screening of PvLEA3 gene mRNA expression levels with qRT-PCR in differentbean varieties (Phaseolus vulgaris L.) subjected to salt and drought stress

Bean is an edible grain legume species with the greatest selectivity in terms of ecological conditions. Increasing the yield per unit area depends on identification and breeding of species resistant to different ecological conditions. In this regard, we aimed to evaluate mRNA levels of the PvLEA3 gene and lipid peroxidation levels in 7 different bean varieties subjected to NaCl and PEG stresses. Lipid peroxidation analysis (MDA) and qRT-PCR analysis were performed with root and leaf tissues sampled at 3 and 27 h of stress conditions. All results showed that the PvLEA3 gene plays a key role in the defense mechanism against both salt and drought stress. According to the analysis results, Göynük-98 and Yunus-90 varieties were more resistant to stress conditions than the others. Our findings revealed that PvLEA3 gene expression might be used as a marker for early detection of the tolerance capability of bean varieties against salt and drought stress conditions.

Screening of PvLEA3 gene mRNA expression levels with qRT-PCR in differentbean varieties (Phaseolus vulgaris L.) subjected to salt and drought stress

Bean is an edible grain legume species with the greatest selectivity in terms of ecological conditions. Increasing the yield per unit area depends on identification and breeding of species resistant to different ecological conditions. In this regard, we aimed to evaluate mRNA levels of the PvLEA3 gene and lipid peroxidation levels in 7 different bean varieties subjected to NaCl and PEG stresses. Lipid peroxidation analysis (MDA) and qRT-PCR analysis were performed with root and leaf tissues sampled at 3 and 27 h of stress conditions. All results showed that the PvLEA3 gene plays a key role in the defense mechanism against both salt and drought stress. According to the analysis results, Göynük-98 and Yunus-90 varieties were more resistant to stress conditions than the others. Our findings revealed that PvLEA3 gene expression might be used as a marker for early detection of the tolerance capability of bean varieties against salt and drought stress conditions.

___

  • Ashraf M, Öztürk M, Ahmad MSA, Aksoy A (2012). Crop Production for Agricultural Improvement. 1st ed. Dordrecht, Netherlands: Springer.
  • Atkinson NJ, Urwin PE (2012). The interaction of plant biotic and abiotic stresses: from genes to the field. J Exp Bot 63: 3523– 3543.
  • Aydın S, Büyük İ, Aras S (2014). Expression of SOD gene and evaluating its role in stress tolerance in NaCl and PEG stressed Lycopersicum esculentum. Turk J Bot 38: 89–98.
  • Barrera-Figueroa BE, Pena-Castro J, Acosta-Gallegos JA, Ruiz- Medrano R, Xoconostle-Cazares B (2007). Isolation of dehydration-responsive genes in a drought tolerant common bean cultivar and expression of a group 3 late embryogenesis abundant mRNA in tolerant and susceptible bean cultivars. Funct Plant Biol 34: 368–381.
  • Bies-Ethève N, Gaubier-Comella P, Debures A, Lasserre E, Jobet E, Raynal M, Cooke R, Delseny M (2008). Inventory, evolution and expression profiling diversity of the LEA (late embryogenesis abundant) protein gene family in Arabidopsis thaliana. Plant Mol Biol 67: 107–124.
  • Cheeseman JM (1993). Plant growth modelling without integrating mechanisms. Plant Cell Environ 16: 137–147.
  • Chomczynski P, Mackey K (1995). Short technical reports. Modification of the TRI reagent procedure for isolation of RNA from polysaccharide- and proteoglycan-rich sources. Biotechniques 19: 942–945.
  • Colmenero-Flores JM, Moreno LP, Smith C, Covarrubias AA (1999). PvLEA-18, a member of a new late-embryogenesis-abundant protein family that accumulates during water stress and in the growing regions of well-irrigated bean seedlings. Plant Physiol 120: 93–103.
  • Cramer GR, Urano K, Delrot S, Pezzotti M, Shinozaki K (2011). Effects of abiotic stress on plants: a systems biology perspective. BMC Plant Biol 17: 163.
  • Dure L, Greenway SC, Galau GA (1981). Developmental biochemistry of cottonseed embryogenesis and germination: changing messenger ribonucleic acid populations as shown by in vitro and in vivo protein synthesis. Biochemistry 20: 4162–
  • Galau GA, Hughes DW (1987). Coordinate accumulation of homologous transcripts of seven cotton LEA gene families during embryogenesis and germination. Dev Biol 123: 213– 221.
  • Gepts P, Beavis WD, Brummer EC, Shoemaker RC, Stalker HT, Weeden NF, Young ND (2005). Legumes as a model plant family. Genomics for Food and Feed Report of the Cross- Legume Advances through Genomics Conference. Plant Physiol 137: 1228–1235.
  • Hiz MC, Canher B, Niron H, Turet M (2014). Transcriptome analysis of salt tolerant common bean (Phaseolus vulgaris L.) under saline conditions. Plos One 9: e92598.
  • Hodges DM, Delong JM, Forney CF, Prange RK (1999). Improving the thiobarbituric acid reactive substances assay for estimating lipid peroxidation in plant tissues containing anthocyanin and other interfering compounds. Planta 207: 604–611.
  • Hundertmark M, Hincha DK (2008). LEA (Late Embryogenesis Abundant) proteins and their encoding genes in Arabidopsis thaliana. BMC Genomics 9: 118–139.
  • Knight JA, Smith SE, Kinder VE, Pieper RK (1988). Urinary lipoperoxides quantified by liquid chromatography, and determination of reference values for adults. Clin Chem 34: 1107–1110.
  • Leprince O, Buitink J (2010). Desiccation tolerance: from genomics to the field. Plant Sci 179: 554–564.
  • Livak KJ, Schmittgen TD (2001). Analysis of relative gene expression data using real-time quantitative PCR and the 2−ΔΔCT method. Methods 25: 402–408.
  • Rao GM, Sumita P, Roshni M, Ashtagimatt MN (2005). Plasma antioxidant vitamins and lipid peroxidation products in pregnancy induced hypertension. Indian Journal of Clinical Biochemistry 20: 198–200.
  • Sheoran IS, Sproule KA, Olson DJH, Ross ARS, Sawhney VK (2006). Proteome profile and functional classification of proteins in Arabidopsis thaliana (Landsberg erecta) mature pollen. Sex Plant Reprod 19: 185–196.
  • Shinozaki K, Yamaguchi-Shinozaki K (2007). Gene networks involved in drought stress response and tolerance. J Exp Bot 58: 221–227.
  • Terzi R, Sağlam A, Kutlu N, Nar H, Kadıoğlu A (2010). Impact of soil drought stress on photochemical efficiency of photosystem II and antioxidant enzyme activities of Phaseolus vulgaris cultivars. Turk J Bot 34: 1–10.
  • Verslues PE, Agarwal M, Katiyar-Agarwal S, Zhu J, Zhu JK (2006). Methods and concepts in quantifying resistance to drought, salt and freezing, abiotic stresses that affect plant water status. Plant J 45: 523–539.
  • Vicient CM, Hull G, Guilleminot J, Devic M, Delseny M (2000). Differential expression of the Arabidopsis genes coding for Em-like proteins. J Exp Bot 51: 1211–1220.
  • Wery J, Grinac P (1983). Uses of legumes and their economic importance. In: Wery J, Grinac P, editors. Technical Handbook on Symbiotic Nitrogen Fixation. Rome, Italy: Food and Agriculture Organization of the United Nations, pp. 1–3.
Turkish Journal of Botany-Cover
  • ISSN: 1300-008X
  • Yayın Aralığı: Yılda 6 Sayı
  • Yayıncı: TÜBİTAK
Sayıdaki Diğer Makaleler

Soil bacteria conferred a positive relationship and improved salt stress tolerance in transgenic pea (Pisum sativum L.) harboring Na+/H+ antiporter

Zahid ALI, Nasr ULLAH, Saadia NASEEM, Muhammad İnam Ul HAQ, Hans Joerg JACOBSEN

Application of data analysis in cold stress: a case study of Nicotiana benthamiana

İbrahim KOÇ, Zihni Onur ÇALIŞKANER, Ertuğrul FİLİZ

Activated expression of EsHD1 enhances drought tolerance in tobacco plants via mitigation of reactive oxygen species-mediated membrane damage

Cheng ZHOU, Zhongyou MA, Lin ZHU, Jiansheng GUO, Xianghuan CUI, Jian ZHU, Jianfei WANG

Ameliorative role of ß-estradiol against lead-induced oxidative stressand genotoxic damage in germinating wheat seedlings

Mucip GENİŞEL, Hülya TÜRK, Serkan ERDAL, Yavuz DEMİR, Ebru GENÇ, İrfan TERZİ

Characterizing the expression of genes involved in iron transport inPakistani peanut varieties under iron deficiency stress

Shamim AKHTAR, Yusuke KAKEI, Khurrum BASHIR, Armghan SHAHZAD, Takashi YAMAKAWA, Muhammad ARSHAD, Fayyaz- UL-HASSAN, Hiromi NAKANISHI, Naoko K. NISHIZAWA

Aquaporins as targets for stress tolerance in plants: genomic complexity and perspectives

WONKEUN JOHN PARK, BENJAMIN TODD CAMPBELL

Development of AFLP markers associated with zucchini yellow mosaicvirus resistance in cucumber (Cucumis sativus L.)

Hasan Özgür ŞIĞVA, Ahmet Fikret FIRAT, Gülden HAZARHUN, Ahmet İPEK

HİKMET BUDAK, LUIGI CATTIVELLI, GERMAN SPANGENBERG

Metabolic and molecular-genetic regulation of proline signaling and itscross-talk with major effectors mediates abiotic stress tolerance in plants

ARYADEEP ROYCHOUDHURY, ADITYA BANERJEE, VIKRAMJIT LAHIRI

Preface - Special Issue on: "Molecular Genetics and Genomics Approaches to Biotic and Abiotic Stress in Model and Complex Organisms"

HİKMET BUDAK, LUIGI CATTIVELLI, GERMAN SPANGENBERG