Detection of Powdery Mildew Growth in Hazelnut Plant Using PCR

Powdery mildew is a serious disease of economically important hazelnut crop in Turkey. Hazelnut production has been extremely affected by the disease in terms of quality and quantity. The disease is caused by two different fungi, namely Erysiphe corylacearum and Phyllactinia guttata. E. corylacearum has been shown to be the responsible one predominantly for the recent economic damage. The fungi produce a mycelium network on hazelnut plants before they sporulate and visually detected. Early detection of these pathogens is important for management as well as understanding their spread and epidemics. In this study, a PCR assay was developed for the detection of both pathogens from hazelnut plant leaves by targeting their ribosomal DNA genes in their internal transcribed spacer (ITS) regions. Two sets of specific primers were designed for the detection of E. corylacearum and P. guttata at an early stage of infection. As a result of PCR, a specific band of 578 bp was observed. The amplicon sequencing confirmed the presence of only E. corylacearum, but not P. guttata. Therefore, this PCR-based test can identify plants that are infected with powdery mildew before they show any visual signs. From there, the infected plants can be treated or removed before the fungus has a chance to produce spores that infect neighboring plants. These results would help tackle the eradication of powdery mildew.

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Beenken L, Brodtbeck T, De Marchi R. 2020. First record of Erysiphe corylacearum on Corylus avellana in Switzerlandand in central Europe. New Disease Reports 41: 11.

Braun U, Cook RTA. 2012. Taxonomic Manual of the Erysiphales (Powdery Mildews). CBS Biodiversity Series 11: 707.

Corpet F. 1988. Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res. 16(22): 10881-10890.

Cunnington JH, Takamatsu S, Lawrie AC, Pascoe IG. 2003. Molecular identification of anamorphic powdery mildews (Erysiphales). Australas. Pl. Pathol. 32: 421-428.

Farr DF, Rossman AY. 2016. Fungal Databases, Systematic Mycology and Microbiology Laboratory, ARS, USDA. http://ntars-gringov/fungaldatabases.

Gil F, Gay JL. 1977. Ultrastructural and physiological properties of the host interfacial components of the haustoria of Erysiphe pisi in vivo and in vitro. Physiological Plant Pathology 10: 1–12.

Guenin S, Mauriat M, Pelloux J, Van Wuytswinkel O, Bellini C, Gutierrez L. 2009. Normalization of qRT-PCR data: the necessity of adopting a systematic, experimental conditionsspecific, validation of references. J. Exp. Bot. 60: 487-493.

Hahn M, Mendgen K. 1997. Characterization of in planta-induced rust genes isolated from a haustorium-specific cDNA library. Molecular Plant-Microbe Interactions 10: 427–437.

Hartney S, Glawe DA, Dugan F, Ammirati J. 2005. First report of powdery mildew on Corylus avellana caused by Phyllactinia guttata in Washington State. Online Plant Health Progress.

Mori Y, Sato Y, Takamatsu S. 2000. Evolutionary analysis of the powdery mildew fungi using nucleotide sequences of the nuclear ribosomal DNA. Mycologia 92: 74–93.

Pscheidt JW, Ocamb CM (Eds.). 2017. Pacific Northwest Plant Disease Management Handbook [online], Corvallis, OR: Oregon State University. http://pnwhandbooks.org/ plantdisease. Accessed 7 September 2017.

Sezer A, Dolar FS, Lucas SJ, Köse Ç, Gümüş E. 2017. First report of the recently introduced, destructive powdery mildew Erysiphe corylacearum on hazelnut in Turkey. Phytoparasitica 45: 577-581.

Takamatsu S, Arakawa H, Shiroya Y, Kiss L, Heluta V. 2015. First comprehensive phylogenetic analysis of the genus Erysiphe (Erysiphales, Erysiphaceae) I. The Microsphaera lineage. Mycologia 107: 475-262489

Takamatsu S, Inagaki M, Niinomi S, Khodaparast SA, Shin HD, Grigaliunaite B, Havrylenko M. 2008. Comprehensive molecular phylogenetic analysis and evolution of the genus Phyllactinia (Ascomycota: Erysiphales) and its allied genera. Mycol Res. 112(Pt 3): 299-315.

Takamatsu S, Kano Y. 2001. PCR primers useful for nucleotide sequencing of rDNA of the powdery mildew fungi. Mycoscience 42: 135-139.

Voegele RT, Mendgen K. 2003. Rust haustoria: Nutrient uptake and beyond, New Phytology 159: 93–100.

White TJ, Bruns TD, Lee S, Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ and White TJ (eds), PCR Protocols. A guide to methods and applications. Academic Press, San Diego,pp. 315–322.
Türk Tarım - Gıda Bilim ve Teknoloji dergisi-Cover
  • ISSN: 2148-127X
  • Yayın Aralığı: Aylık
  • Başlangıç: 2013
  • Yayıncı: Turkish Science and Technology Publishing (TURSTEP)
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