The Genetic Characterization of DGAT1 Gene in Donkey Populations Reared in Thrace Region of Turkey

The Genetic Characterization of DGAT1 Gene in Donkey Populations Reared in Thrace Region of Turkey

AcylCoA: diacylglycerol acyltransferase (DGAT1) gene hasa considerable effect on milk content and yield in cattle witha substitution of lysine by alanine in the exon 8 of the gene.Moreover there are many other researches comprising theDGAT1 gene on different farm animals, such as buffalo,sheep and goat but there is no information about the DGAT1gene in donkeys. In this study, the polymorphism of DGAT1gene in donkey populations reared in Thrace region ofTurkey has been investigated by restriction fragment lengthpolymorphism (RFLP) via EaeI (CfrI) restriction enzyme.EaeI restriction site was found in cattle breeds which resultedafter K232A substitution, Lysine (AAG) to Alanine (GCG)variant but this restriction site was not found in donkeypopulations. A novel single-nucleotide polymorphism(GA substitution) in the DGAT1 gene at position 10,435lacks this restriction site which results only Alanine variant(GCA) instead of Lysine variant. This novel singlenucleotide polymorphism in the DGAT1 gene was found inthe studied donkey breeds.

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  • Anonymous (2018). Turkish Statistical Institude. Animal statistics database. Retrieved in May, 10, 2018 fromhttps://biruni.tuik.gov.tr/hayvancilikapp/hayvancilik.zul
  • Cases S, Smith S J, Zheng Y W, Myers H M, Lear S R, Sande E, Novak S, Collins C, Welch C B, Lusis A J, Erickson S K & Farese Jr R V (1998). Identification of a gene encoding an acyl CoA:diacylglycerol acyltransferase, a key enzyme in triacylglycerol synthesis. Proceedings of the National Academy of Sciences of the United States of America USA 95: 13018-13023
  • Coppieters W, Riquet J, Arranz J J, Berzi P, Cambisano N, Grisart B, Karim L, Marcq F, Moreau L, Nezer C, Simon P, Vanmanshoven P, Wagenaar D & Georges M (1998). A QTL with major effect on milk yield and composition maps to bovine chromosome 14. Mammalian Genome 9: 540-544
  • Gautier M, Capitan A, Fritz S, Eggen A, Boichard D & Druet T (2007). Characterization of the DGAT1 K232A and variable number of tandem repeat polymorphisms in French dairy cattle. Journal of Dairy Science 90: 2980-2988
  • Grisart B, Coppieters W, Farnir F, Karim L, Ford C, Berzi P, Cambisano N, Mni M, Reid S, Simon P, Spelman R, Georges M & Snell R (2002). Positional candidate cloning of a QTL in dairy cattle: identification of a missense mutation in the bovine DGAT1 gene with major effect on milk yield and composition. Genome Research 12: 222- 231
  • Grisart B, Farnir F, Karim L, Cambisano N, Kim J J, Kvasz A, Mni M, Simon P, Frère J M, Coppieters W & Georges M (2004). Genetic and functional confirmation of the causality of the DGAT1 K232A quantitative trait nucleotide in affecting milk yield and composition. Proceedings of the National Academy of Sciences of the United States of America 101: 2398-2403
  • Kaupe B, Winter A, Fries R & Erhardt G (2004). DGAT1 polymorphism in Bos indicus and Bos Taurus cattle breeds. Journal of Dairy Research 71: 182-187
  • Özdil F & İlhan F (2012). DGAT1-exon 8 polymorphism in Anatolian buffalo. Livestock Science 149: 83-87.
  • Salimei E, Fantuz F, Coppola R, Chiofalo B, Polidori P & Varisco G (2004). Composition and characteristics of ass’s milk. Animal Research 53: 67-78
  • Sambrook J, Fritsch E F & Maniatis T (1989). Molecular cloning: A laboratory Manual, vol. 3, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y
  • Schennink A, Stoop W M, Visker M H P W, Heck J M L, Bovenhuis H, van der Poel J J, van Valenberg H J F & van Arendonk J A M (2007). DGAT1 underlies large genetic variation in milk-fat composition of dairy cows. Animal Genetics 38: 467-473
  • Smith S J, Cases S, Jensen D R, Chen H C, Sande E, Tow B, Sanan D A, Raber J, Eckel R H & Farese R V.Jr (2000). Obesity resistance and multiple mechanisms of triglyceride synthesis in mice lacking Dgat. Nature Genetics 25: 87-90
  • Spelman R J, Ford C A, McElhinney P, Gregory G C & Snell R G (2002). Characterization of the DGAT1 gene in the New Zealand dairy population. Journal of Dairy Science 85: 3514-3517
  • Thaller G, Krämer W, Winter A, Kaupe B, Erhardt G & Fries R (2003). Effects of DGAT1 variants on milk production traits in German cattle breeds Journal of Animal Science 81: 1911-1918
  • Weller J I, Golik M, Seroussi E, Ezra E & Ron M (2002). Population-wide analysis of a QTL affecting milk-fat production in the Israeli Holstein population. Journal of Dairy Science 86: 2219-2227
  • Winter A, Kramer W, Werner F A O, Kollers S, Kata S, Durstewitz G, Buitkamp J, Womack J E, Thaller G & Fries R (2002). Association of a lysine-232⁄ alanine polymorphism in a bovine gene encoding acyl-CoA:diacylglycerol acyltransferase (DGAT1) with variation at a quantitative trait locus for milk fat content. Proceedings of the National Academy of Sciences of the United States of America 99: 9300-9305