Mitochondrial evidence indicates a shallow phylogeographic structure for Jaculus blanfordi (Murray, 1884) populations (Rodentia: Dipodidae)

Mitochondrial evidence indicates a shallow phylogeographic structure for Jaculus blanfordi (Murray, 1884) populations (Rodentia: Dipodidae)

Our study was performed on the phylogeographic structure of Blanford s jerboa ( Jaculus blanfordi(Murray, 1884))collected from nine localities in Iran, Turkmenistan, and Uzbekistan and was based on mitochondrial evidence indicating a slightphylogeographic divergence among the populations. We aimed to amplify two frequently used mitochondrial markers, cytochrome b(cytb ) and cytochrome c oxidase subunit I (COI) fragments, from 33 specimens obtained from the abovementioned countries. Ourphylogeographic analyses uncovered two distinct groups, thus supporting the presence of two subspecies:J. b. blanfordiin Iran andJ.b. turcmenicusin northern Turkmenistan and Uzbekistan. Finally, we discuss the intraspecies genetic structure of Blanford s jerboa inrelation to the biogeography of the Middle East and Middle Asia.

___

  • Akaike H (1974). New look at statistical-model identification. IEEE T Automat Contr 19: 716-723.
  • Avise JC (2000). Phylogeography: The History and Formation of Species. Cambridge, MA, USA: Harvard University Press.
  • Bandelt HJ, Forster P, Rohl A (1999). Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol 16: 37-48.
  • Ben Faleh A, Allaya H, Shahabuddin G (2016). Geographic patterns of genetic variation in the greater Egyptian jerboa Jaculus orientalis (Dipodidae, Rodentia) from Tunisia. Bioch Syst Ecol 68: 15-22.
  • Ben Faleh A, Granjon L, Tatard C, Ben Othmen A, Said K, Cosson JF (2011). Phylogeography of the greater Egyptian jerboa ( Jaculus orientalis ) (Rodentia: Dipodidae) in Mediterranean North Africa. J Zool 286: 208-220.
  • Ben Faleh A, Granjon L, Tatard C, Boratynski Z, Cosson JF, Said K (2012). Phylogeography of two cryptic species of African desert jerboas (Dipodidae: Jaculus ). Biol J Linn Soc 107: 27-38.
  • Boratynski Z, Brito JC, Mappes T (2012). The origin of two cryptic species of African desert jerboas (Dipodidae: Jaculus ). Biol J Linn Soc 105: 435-445.
  • Chelomina GN, Atopkin DM (2010). Molecular genetic evidence of a deep phylogenetic discontinuity between the Asian and European races of pygmy wood mouse based on the mitochondrial cytochrome b gene variation. Mol Biol+ 44: 699-708.
  • Darvish J, Hajjar T, Matin M, Haddad F, Akbary RS (2008). New species of five-toed jerboa (Rodentia: Dipodidae, Allactaginae) from north-east Iran. Journal of Sciences, Islamic Republic of Iran 19: 103-109.
  • Darvish J, Hosseini F (2005). New species of three-toed jerboa Jaculus thaleri sp. nov. (Dipodidae, Rodentia) from the deserts of Khorasan province, Iran. Iranian Journal of Animal Biosystematics 1: 21-27.
  • Darvish J, S iahsarvie R, Mirshamsi O, Kayvanfar N, Hashemi N, Shakib FS (2006). Diversity of the rodents of northeastern Iran. Iranian Journal of Animal Biosystematics 2: 57-76.
  • Darvish J, Tarahomi M, Dianat M, Mohammadi Z, Haddadian Shad H, Moshtaghi S (2016). Biosystematics of three-toed jerboas, genus Jaculus (Erxleben, 1777) from Iran (Dipodidae, Rodentia). Iranian Journal of Animal Biosystematics 12: 123- 139.
  • Dianat M, Aliabadian M, Darvish J, Akbarirad S (2013). Molecular phylogeny of the Iranian Plateau five-toed jerboa, Allactaga (Dipodidea: Rodentia), inferred from mtDNA. Mammalia 77: 95-103.
  • Elenga H, Peyron O, Bonnefille R, Prentice IC, Jolly D, Cheddadi R, Guiot J, Andrieu V, Bottema S, Buchet G et al. (2000). Pollen- based biome reconstruction for southern Europe and Africa 18,000 yr bp. J Biogeogr 27: 621-634.
  • Ellerman JR (1940). The Families and Genera of Living Rodents. Vol. 1. Rodents Other Than Muridae. London, UK: Trustees of the British Museum (Natural History).
  • Excoffier L (2004). Patterns of DNA sequence diversity and genetic structure after a range expansion: lessons from the infinite- island model. Mol Ecol 13: 853-864.
  • Geptner VG (1938). Zoogeographical features of the desert fauna of Turkmenistan and its origin. Bulletin of Moscow Society of Nature Researchers, Biological Series 47: 329-338 (in Russian).
  • Hall TA (1999). BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/ NT. Nucl Acid S 41: 95-98.
  • Harrison DL, Bates PJJ (1991). The Mammals of Arabia. Sevenoaks, UK: Harrison Zoological Museum.
  • Heptner VG (1984). Contributions to phylogeny and classification of jerboas (Dipodidae) of the fauna of the USSR. Archives of Zoological Museum Moscow State University 22: 37-60 (in Russian).
  • Holden M, Musser GG (2005). Family Dipodidae. In: Wilson DE and Reeder DM, editors. Mammal Species of the World: A Taxonomic and Geographic Reference. Baltimore, MD, USA: Johns Hopkins University Press, pp. 871-893.
  • Huelsenbeck JP, Ronquist F, Nielsen R, Bollback JP (2001). Bayesian inference of phylogeny and its impact on evolutionary biology. Science 294: 2310-2314.
  • Jobb G, von Haeseler A, Strimmer K (2004). TREEFINDER: a powerful graphical analysis environment for molecular phylogenetics. BMC Evol Biol 4: 18.
  • Korovin EP (1961). The Vegetation of Middle Asia and Southern Kazakhstan, Book 1. Tashkent, Uzbekistan: SSR Academy of Sciences (in Russian).
  • Melnikov D, Ananjeva NB, Papenfuss TJ (2013). A new species of Pseudotrapelus (Agamidae, Sauria) from Nizwa, Oman. Russian Journal of Herpetology 20: 79-84.
  • Melville J, Hale JM, Mantziou G, Ananjeva NB, Milto K, Clemann N (2009). Historical biogeography, phylogenetic relationships and intraspecific diversity of agamid lizards in the Central Asian deserts of Kazakhstan and Uzbekistan. Mol Phylogenet Evol 53: 99-112.
  • Miller SA, Dykes DD, Polesky HF (1988). A simple salting out procedure for extraction DNA from human nucleated cells. Nucleic Acids Res 16: 12-15.
  • Mohammadi S, Afonso S, Abibi MA, Melo-Ferreira J, Campos R (2016). A new and highly divergent mitochondrial lineage in the small five-toed jerboa, Allactaga elater , from Iran (Mammalia: Rodentia). Zool Middle East 62: 206-211.
  • Naderi G, Kaboli M, Koren T, Karami M, Zupan S, Rezaei HR, Krystufek B (2013). Mitochondrial evidence uncovers a refugium for the fat dormouse ( Glis glis Linnaeus, 1766) in Hyrcanian forests of northern Iran. Mamm Biol 79: 202-207.
  • Naderi G, Mohammadi S, Imani A, Karami M (2014). Habitat selection and burrow structure of Blanford’s jerboa, Jaculus blanfordi (Mammalia: Rodentia) from the central desert of Iran. Acta Zool Bulgar 66: 225-228.
  • Nanova O (2014). Geographical variation in the cranial measurements of the midday jird Meriones meridianus (Rodentia: Muridae) and its taxonomic implications. J Zool Syst Evol Res 52: 75-85.
  • Pisano J, Condamine FL, Lebedev V, Bannikova A, Quere JP, Shenbrot GI, Pages M, Michaux JR (2015). Out of Himalaya: the impact of past Asian environmental changes on the evolutionary and biogeographical history of Dipodoidea (Rodentia). J Biogeogr 42: 856-870.
  • Posada D (2008). JMODELTEST: Phylogenetic model averaging. Mol Biol Evol 25: 1253-1259.
  • Rozas J, Sánchez-DelBarrio JC, Messeguer X, Rozas R (2003). DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19: 2496-2497.
  • Shenbrot GI, Feldstein T, Meiri S (2016). Are cryptic species of the Lesser Egyptian Jerboa, Jaculus jaculus (Rodentia, Dipodidae), really cryptic? Re-evaluation of their taxonomic status with new data from Israel and Sinai. J Zool Syst Evol Res 54: 148- 159.
  • Shenbrot G, Molur S (2008). Jaculus blanfordi . The IUCN Red List of Threatened Species. Gland, Switzerland: IUCN.
  • Shenbrot GI, Sokolov VE, Heptner VG, Kovalskaya YM (1995). The Mammals of Russia and Adjacent Regions. Dipodoidea. Moscow, Russia: Nauka Press.
  • Slatkin M, Hudson RR (1991). Pairwise comparisons of mitochondrial DNA sequences in stable and exponentially growing populations. Genetics 129: 555-562.
  • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013). MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Mol Biol Evol 30: 2725-2729.
  • Tarasov PE, Volkova VS, Webb T, Guiot J, Andreev AA, Bezusko LG, Bezusko TV, Bykova GV, Dorofeyuk NI, Kvavadze EV et al. (2000). Last glacial maximum biomes reconstructed from pollen and plant macrofossil data from northern Eurasia. J Biogeogr 27: 609-620.
  • Thompson JD, Higgins DG, Gibson TJ (1994). CLUSTAL W: Improving the sensitivity of progressive multiple alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
  • Velichko AA, editor (2009). Paleoklimaty i paleolandshafty vnetropicheskogo prostranstva Severnogo polushariya. Pozdniy pleystotsen-golotsen. Moscow, Russia: GEOS (in Russian).
  • Vinogradov BS, Bondar EP (1949). About finding a new species of the genus Jaculus Erxl. ( J. turcmenicus sp. nov., Mammalia, Rodentia) in Turkmenistan. Reports of the Academy of Sciences 65: 559-566.
Turkish Journal of Zoology-Cover
  • ISSN: 1300-0179
  • Yayın Aralığı: Yılda 6 Sayı
  • Yayıncı: TÜBİTAK