Toprak kaynaklı aktinomisetlerin antifungal aktivitesinin taranması

Türkiye’nin batısından toplanan 35 toprak örneğinden izole edilen toplam 288 aktinomiset suşu Aspergillus niger ATCC-1094 , A. parasiticus NRRL-465 , Fusarium moniliforme NRRL 1866 , F. solani NRRL-13414 , Penicillium chrysogenum NRRL 807 , A. fumigatus, Alternaria citri, Al. tenuissima, Athelia rolfsii, F. acuminatum, F. aveneceum, F. clamydosporium, F. culmarum, F. equiseti, F. oxysporum, F. semitectum, F. subglutanas, Fusarium sp., Gaeumannomyces graminis, Mycosphaerella rabiei, P. citrinum ve P. piceum gibi hasat öncesi ve sonrası fungal patojenlere karşı test edilmiştir. Birinci taramada, test edilen suşların % 30,55’i fungal patojenlere karşı inhibisyon potansiyeli göstermiştir. Etkin izolatlardan 7 suş birinci taramada yüksek inhibisyon potansiyellerine dayalı olarak dört farklı fermantasyon ortamı ile ikinci tarama için seçilmiştir. Fermantasyon B ortamının hücresiz süpernatantı test funguslarına karşı geniş spectrum ve yüksek inhibisyon potansiyeli göstermiştir. Etil asetat ile ektraksiyondan sonra, seçilen yedi suştan XF, BF, AM3.1, 9M ve 14M özellikle bazı Aspergillus ve Fusarium üyelerine karşı antifungal aktivite göstermişlerdir. Bu sonuçlar; test edilen beş aktinomiset suşunun hasat öncesi ve sonrası fungal patojenlere karşı potansiyel aktiviteye sahip olduğunu, zirai ürünlerin korunması için kullanışlı olabilecek antagonistik bileşiklerinin üretilebilir ve antifungal aktivitelerini kaybetmeden elde edilebilir olduğunu işaret etmektedir

Screening the antifungal activity of soilborne actinomycetes

A total of 288 actinomycete strains, isolated from 35 soil samples collected from western Turkey, were tested against pre- and post-harvest fungal pathogens such as Aspergillus niger ATCC-1094 , A. parasiticus NRRL-465 , Fusarium moniliforme NRRL 1866 , F. solani NRRL-13414 , Penicillium chrysogenum NRRL 807 , A. fumigatus, Alternaria citri, Al. tenuissima, Athelia rolfsii, F. acuminatum, F. aveneceum, F. clamydosporium, F. culmarum, F. equiseti, F. oxysporum, F. semitectum, F. subglutanas, Fusarium sp., Gaeumannomyces graminis, Mycosphaerella rabiei, P. citrinum and P. piceum. During primary screening, 30.55% of the strains showed inhibition potential against the test pathogen fungi. Of the effective isolates, seven strains were selected for secondary screening with four different fermentation media based on their high inhibition potential in primary screening. The cell-free supernatant of fermentation B medium showed broad-spectrum and high inhibition potential against the test fungi. After extraction with ethyl acetate, XF, BF, AM3.1, 9M and 14M from the selected seven strains exhibited antifungal activity against particularly some members of Fusarium and Aspergillus genera. These results indicate that the tested five actinomycete strains have potential activity against pre- and post-harvest pathogens, and their antagonist compounds can be produced and obtained without the loss of antifungal effects, which could be useful for the protection of agricultural products

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  • Asan, A. 2015. Aspergillus, Penicillium, and Related Species Reported from Turkey. Mycotaxon. 89/1: 155-157.
  • Dean, R., Van Kan, J. A. L., Pretorius, Z. A., Hammond-Kosack, K. E., Di Pietro, A., Spanu, P. D., Rudd, J. J., Dickman, M., Kahmann, R., Ellis, J., Foster, G .D. 2012. The Top 10 fungal pathogens in molecular plant pathology. Molecular Plant Pathology. 13/4: 414-430.
  • Demirel, R., Sarıozlu, N. Y., İlhan, S. 2013. Polymerase chain reaction (PCR) identification of terverticillate Penicillium species isolated from agricultural soils in Eskişehir province. Brazilian Archives of Biology and Technology. 56/6: 980-984.
  • Duraipandiyan, V., Sasi, A. H., Islam, V. I. H., Valanarasu, M., Ignacimuthu, S. 2010. Antimicrobial properties of actinomycetes from the soil of Himalaya. Journal of Mycologie Medicale. 20/1: 15-20.
  • Kathiresan, K., Balagurunathan, R., Masilamani Selvam, M. 2005. Fungicidal activity of marine actinomycetes against phytopathogenic fungi. Indian Journal of Biotechnology. 4/2: 271-276.
  • Kaur, M., Rana, S., Sharma, R. 2015. Screening and evaluation of antimicrobial activity of actinomycetes isolated from rhizosphere of Heracleum candicans, International Journal of Farm Sciences. 5/1: 83-89.
  • Kitouni, M., Boudemagh, A., Oulmi, L., Reghioua, S., Boughachiche, F., Zerizer, H., Hamdiken, H., Couble, A., Mouniee, D., Boulahrouf, A., Boiron, P. 2005. Isolation of actinomycetes producing bioactive substance from water, soil and tree bark samples of the north-east of Algeria. Journal of Mycologie Medical. 15/1: 45-51.
  • Kumar, V., Bharti, A., Negi, Y.K., Gusain, O., Pandey, P., Bisht, G. S. 2012. Screening of Actinomycetes from Earthworm Castings for Their Antimicrobial Activity and Industrial Enzymes. Brazilian Journal of Microbiology. 43/1: 205-214.
  • Murray, P. R., Baron, E. J., Pfaller, M. A., Tenover, F. C., Yolken, H. R. 1995. Manual of Clinical Microbiology, 6th Ed. ASM Press, Washington DC, 15-18.
  • Nurkanto, A., Julistiono, H. 2014. Screening and study of antifungal activity of leaf litter actinomycetes isolated from Ternate Island, Indonesia. Asian Pacific Journal of Tropical Medicine. 7/1: 238-243.
  • Nurkanto, A., Julistiono, H., Agusta, A., Sjamsuridzal, W. 2012. Screening Antimicrobial Activity of Actinomycetes Isolated from Raja Ampat, West Papua, Indonesia. Makara Journal of Science. 16/1: 21-26.
  • Oksay, M. 2009. Antifungal and antibacterial compounds from Streptomyces strains. African Journal of Biotechnology. 8/13: 2007-2017.
  • Samson, R. A., Visagie, C. M., Houbraken, J., Hong, S. B., Hubka, V., Klaassen, C. H. W., Perrone, G., Seifert, K. A., Susca, A., Tanney, J. B., Varga, J., Kocsube, S., Szigeti, G., Yaguchi, T., Frisvad, J. C. 2014. Phylogeny, identification and nomenclature of the genus Aspergillus. Studies in Mycology. 78: 141-73.
  • Saxena, A., Upadhyay, R., Kumar, D., Kango, N. 2013. Isolation, antifungal activity and characterization of soil actinomycetes. Journal of Science and Industrial Research. 72: 491-497.
  • Selvameenal, L., Radhakrishnan, M., Balagurunathan, R., Antibiotic Pigment from Desert Soil Actinomycetes; Biological Activity, Purification and Chemical Screening, Indian Journal of Pharmaceutical Sciences. 71/5: 499– 504.
  • Sen, A., Batra, A. A. 2012. Evaluation of antimicrobial activity of different solvent extracts of medicinal plant: Melia azedarach l. International Journal of Current Pharmaceutical Research. 4/2: 67-73.
  • Sharma, P., Das, R., Kalita, M. C., Thakur, D. 2014. Investigation of extracellular antifungal proteinaceous compound produced by Streptomyces sp. 5K10. African Journal of Microbiology Research. 8/10: 986-993.
  • Şengül, İ. Y., Yücel, E. 2015. Antimicrobial properties of wild fruits, Biological Diversity and Conservation. 8/1: 69- 77.
  • Visagie, C. M., Houbraken, J., Frisvad, J. C., Hong, S. B., Klaassen, C. H. W., Perrone, G., Seifert, K. A., Varga, J., Yaguchi, T., Samson, R. A. 2014. Identification and nomenclature of the genus Penicillium. Studies in Mycology. 78: 343–371.
  • Walker, J. D., Colwell, R.R. 1975. Factors Affecting Enumeration and Isolation of Actinomycetes from Chesapeake Bay and Southeastern Atlantic Ocean Sediments. Marine Biology. 30: 193-201.
  • Yamamura, H., Hayakawa, M., Limura, Y. 2003. Application of sucrose-gradient centrifugation for selective isolation of Nocardia spp. from soil. Journal of Applied Microbiology. 95/4: 677-685.
  • Yoon, J., Miwa, H., Ahmed, I., Yokota, A., Fujiwara, T. 2010. Rhodococcus baikonurensis BTM4c, a boron-tolerant actinobacterial strain isolated from soil. Bioscience, Biotechnology, and Biochemistry. 74/1: 178-181.