Phylogenetic relationships among populations of Pristurus rupestris Blanford,1874 (Sauria: Sphaerodactylidae) in southern Iran

We examined intraspecific relationships of the subspecies Pristurus rupestris iranicus from the northern Persian Gulf area (Hormozgan, Bushehr, and Sistan and Baluchestan provinces). Phylogenetic relationships among these samples were estimated based on the mitochondrial cytochrome b gene. We used three methods of phylogenetic tree reconstruction (maximum likelihood, maximum parsimony, and Bayesian inference). The sampled populations were divided into 5 clades but exhibit little genetic divergence between populations, suggesting that these all represent a single species and subspecies. The low genetic divergences suggest that the species may have expanded its range within Iran since the last drying period of the Persian Gulf.

Phylogenetic relationships among populations of Pristurus rupestris Blanford,1874 (Sauria: Sphaerodactylidae) in southern Iran

We examined intraspecific relationships of the subspecies Pristurus rupestris iranicus from the northern Persian Gulf area (Hormozgan, Bushehr, and Sistan and Baluchestan provinces). Phylogenetic relationships among these samples were estimated based on the mitochondrial cytochrome b gene. We used three methods of phylogenetic tree reconstruction (maximum likelihood, maximum parsimony, and Bayesian inference). The sampled populations were divided into 5 clades but exhibit little genetic divergence between populations, suggesting that these all represent a single species and subspecies. The low genetic divergences suggest that the species may have expanded its range within Iran since the last drying period of the Persian Gulf.

___

  • Anderson SC (1999). The Lizards of Iran. Contributions to Herpetology, Vol. 15. St. Louis, MO, USA: Society for the Study of Amphibians and Reptiles.
  • Arnold EN (2009). Relationships, evolution and biogeography of Semaphore geckos, Pristurus (Squamata: Sphaerodactylidae) based on morphology. Zootaxa 2060: 1–21.
  • Burbrink FT, Lawson R, Slowinski JB (2000). Mitochondrial DNA phylogeography of the North American rat snake (Elaphe obsoleta): a critique of the subspecies concept. Evolution 54: 2107–2114.
  • Dakhteh SMH, Anderson SC, Kami HG (2007). Stenodactylus khobarensis (Haas, 1957): an addition to the Iranian herpetofauna. Russ J Herpet 14: 229–231.
  • de Queiroz A, Lawson R, Lemos-Espinal JA (2002). Phylogenetic relationships of North American garter snakes (Thamnophis) based on four mitochondrial genes: how much DNA sequence is enough? Mol Phylogenet Evol 22: 315–329.
  • Felsenstein J (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783–791.
  • Feroze A, Malik SA, Kilpatrick WC (2010). Phylogenetic relationships of medically important vipers of Pakistan inferred from cytochrome b sequences. J Anim Plant Sci 20: 147–157.
  • Hall TA (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95 ⁄ 98 ⁄ NT. Nucl Acid S 41: 95–98.
  • Hoelzer G, Meinick D (1994a). Patterns of speciation and limits to phylogenetic resolution. Trends Ecol Evol 9: 104–107.
  • Hoelzer G, Meinick D (1994b). Reply from G.A. Hoelzer and D.J. Melnick. Trends Ecol Evol 9: 298–299.
  • Huelsenbeck JP, Ronquist F (2001). MR BAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754–755.
  • Kabir S, Shahriar M, Hamidul Kabir ANM, Uddin MG (2006). High salt SDS-based method for the direct extraction of genomic DNA from three different gram-negative organisms. CDR Journal 1: 57–64.
  • Kuhn TS, Mooers AQ, Thomas GH (2011). A simple polytomy resolver for dated phylogenies. Method Ecol Evol 2: 427–436.
  • Lambeck K (1996). Shoreline reconstruction for the Persian Gulf since the last glacial maximum. Earth Planet Sc Lett 142: 43–57.
  • Maddison W (1989). Reconstructing character evolution on polytomous cladograms. Cladistics 5: 365–377.
  • Palumbi SA, Martin A, Romano S, McMillan WO, Stice L, Grabowski G (1991). The Simple Fool’s Guide to PCR Version 2.0. Honolulu, HI, USA: University of Hawaii.
  • Papenfuss TJ, Jackman T, Bauer A, Stuart BL, Robinson MD, Parham JF (2009). Phylogenetic relationships among species in the Sphaerodactylidae lizard genus Pristurus. P Calif Acad Sci 60: 675–681.
  • Posada D (2008). jModelTest: Phylogenetic model averaging. Mol Biol Evol 25: 1253–1256.
  • Swofford DL (2003). PAUP*. Phylogenetic Analysis Using Parsimony (* And Other Methods), Version 4.0b10. Sunderland, MA, USA: Sinauer Associates.
  • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013). MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Mol Biol Evol 30: 2725–2729.
  • Uetz P, Hošek J (2013). The Reptile Database. Available at http:// www.reptile-database.org. 1
Turkish Journal of Zoology-Cover
  • ISSN: 1300-0179
  • Yayın Aralığı: 6
  • Yayıncı: TÜBİTAK
Sayıdaki Diğer Makaleler

The first record of age structure and body size of the Suphan Racerunner, Eremias suphani Başoğlu & Hellmich, 1968

NAZAN ÜZÜM, AZİZ AVCI, YUSUF KUMLUTAŞ, NURETTİN BEŞER, ÇETİN ILGAZ

Relationships between fish length and otolith size for five cyprinid speciesfrom Lake Ladik, Samsun, Turkey

SAVAŞ YILMAZ, OKAN YAZICIOĞLU, RAMAZAN YAZICI, NAZMİ POLAT

Some morphological characteristics and neonatal weights of reintroduced gazelle (Gazella subgutturosa) in Turkey

ŞÜKRÜ GÜRLER, FARUK BOZKAYA, DENİZ ÖZÜT, MUSTAFA DURMUŞ

A new species of Australomymar (Hymenoptera: Mymaridae), with a key to species

XIANGXIANG JIN, CHENGDE LI

Zooplankton abundance, biomass, and size structure in the coastal waters of the northeastern Mediterranean Sea

Tuba KURT, SEVİM POLAT

Effects of the pyrethroid insecticide deltamethrin on the hemocytes of Galleria mellonella

DENİZ KURT, Deniz KURT, TAMER KAYIŞ

The first record of age structure and body size of the Suphan Racerunner, Eremias suphani Başoğlu & Hellmich, 1968

NAZAN ÜZÜM, AZİZ AVCI, YUSUF KUMLUTAŞ, NURETTİN BEŞER, ÇETİN ILGAZ

Reproduction, postnatal development, and social behavior of Ellobius lutescens Thomas, 1897 (Mammalia: Rodentia) in captivity

ALAETTİN KAYA, YÜKSEL COŞKUN

Age structure of Hemidactylus turcicus (L., 1758) (Sauria: Gekkonidae) from southwestern Anatolia (Muğla, Turkey)

BETÜL KANAT, CEMAL VAROL TOK

The determination of spider species (Araneae) in barley and wheatfields of Northern Cyprus

CELALETTİN GÖZÜAÇIK, MUSTAFA GÜLLÜ, TUNCAY TÜRKEŞ, AYDA KONUKSAL