Genetic Causes of Inner Ear Anomalies: a Review from the Turkish Study Group for Inner Ear Anomalies

Genetic Causes of Inner Ear Anomalies: a Review from the Turkish Study Group for Inner Ear Anomalies

Inner ear anomalies diagnosed using a radiological study are detected in almost 30% of cases with congenital or prelingual-onset sensorineural hearing loss. Inner ear anomalies can be isolated or occur along with a part of a syndrome involving other systems. Although astonishing progress has been made in research aimed at revealing the genetic causes of hearing loss in the past few decades, only a few genes have been linked to inner ear anomalies. The aim of this review is to discuss the known genetic causes of inner ear anomalies. Identifying the genetic causes of inner ear anomalies is important for guiding clinical care that includes empowered reproductive decisions provided to the affected individuals. Furthermore, understanding the molecular underpinnings of the development of the inner ear in humans is important to develop novel treatment strategies for people with hearing loss.

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  • Lantos PM, Maradiaga-Panayotti G, Barber X, Raynor E, Tucci D, Hoffman K, et al. Geographic and Racial Disparities in Infant Hearing Loss. Otolaryngol Head Neck Surg 2018:194599818803305.
  • Nance WE. The genetics of deafness. Ment Retard Dev Disabil Res Rev 2003;9:109-19.
  • Bamiou DE, Phelps P, Sirimanna T. Temporal bone computed tomography findings in bilateral sensorineural hearing loss. Arch Dis Child 2000;82:257-60.
  • Chen J, Tambalo M, Barembaum M, Ranganathan R, Simões-Costa M, Bronner ME, et al. A systems-level approach reveals new gene regulatory modules in the developing ear. Development 2017;144:1531-43.
  • Torii H, Yoshida A, Katsuno T, Nakagawa T, Ito J, Omori K, et al. Septin7 regulates inner ear formation at an early developmental stage. Dev Biol 2016;419:217-28.
  • Whitfield TT, Riley BB, Chiang MY, Phillips B. Development of the zebrafish inner ear. Dev Dyn 2002;223:427-58.
  • Montcouquiol M, Kelley MW. Development and Patterning of the Cochlea: From Convergent Extension to Planar Polarity. Cold Spring Harb Perspect Med 2019. pii: a033266.
  • Litsiou A, Hanson S, Streit A. A balance of FGF, BMP and WNT signalling positions the future placode territory in the head. Development 2005;132:4051-62.
  • Steventon B, Mayor R, Streit A. Mutual repression between Gbx2 and Otx2 in sensory placodes reveals a general mechanism for ectodermal patterning. Dev Biol 2012;367:55-65.
  • Zou D, Silvius D, Fritzsch B, Xu PX. Eya1 and Six1 are essential for early steps of sensory neurogenesis in mammalian cranial placodes. Development 2004;131:5561-72.
  • Ishihara T, Sato S, Ikeda K, Yajima H, Kawakami K. Multiple evolutionarily conserved enhancers control expression of Eya1. Dev Dyn 2008;237:3142-56.
  • Li X, Oghi KA, Zhang J, Krones A, Bush KT, Glass CK, et al. Eya protein phosphatase activity regulates Six1-Dach-Eya transcriptional effects in mammalian organogenesis. Nature 2003;426:247-54.
  • Padanad MS, Bhat N, Guo B, Riley BB. Conditions that influence the response to Fgf during otic placode induction. Dev Biol 2012;364:1-10.
  • Makki N, Capecchi MR. Identification of novel Hoxa1 downstream targets regulating hindbrain, neural crest and inner ear development. Dev Biol 2011;357:295-304.
  • Yao D, Zhao F, Wu Y, Wang J, Dong W, Zhao J, et al. Dissecting the differentiation process of the preplacodal ectoderm in zebrafish. Dev Dyn 2014;243:1338-51.
  • Sai X, Yonemura S, Ladher RK. Junctionally restricted RhoA activity is necessary for apical constriction during phase 2 inner ear placode invagination. Dev Biol 2014;394:206-16.
  • Evsen L, Sugahara S, Uchikawa M, Kondoh H, Wu DK. Progression of neurogenesis in the inner ear requires inhibition of Sox2 transcription by neurogenin1 and neurod1. J Neurosci 2013;33:3879-90.
  • Alsina B, Abelló G, Ulloa E, Henrique D, Pujades C, Giraldez F. FGF signaling is required for determination of otic neuroblasts in the chick embryo. Dev Biol 2004;267:119-34.
  • Jeon SJ, Fujioka M, Kim SC, Edge AS. Notch signaling alters sensory or neuronal cell fate specification of inner ear stem cells. J Neurosci 2011;31:8351-8.
  • Kantarci H, Edlund RK, Groves AK, Riley BB. Tfap2a promotes specification and maturation of neurons in the inner ear through modulation of Bmp, Fgf and notch signaling. PLoS Genet 2015;11:e1005037.
  • Coate TM, Raft S, Zhao X, Ryan AK, Crenshaw EB, Kelley MW. Otic mesenchyme cells regulate spiral ganglion axon fasciculation through a Pou3f4/EphA4 signaling pathway. Neuron 2012;73:49-63.
  • Raft S, Coate TM, Kelley MW, Crenshaw EB, Wu DK. Pou3f4-mediated regulation of ephrin-b2 controls temporal bone development in the mouse. PLoS One 2014;9:e109043.
  • Wu DK, Kelley MW. Molecular mechanisms of inner ear development. Cold Spring Harb Perspect Biol 2012;4:a008409.
  • Chen P, Segil N. p27(Kip1) links cell proliferation to morphogenesis in the developing organ of Corti. Development 1999;126:1581-90.
  • Jones JM, Montcouquiol M, Dabdoub A, Woods C, Kelley MW. Inhibitors of differentiation and DNA binding (Ids) regulate Math1 and hair cell formation during the development of the organ of Corti. J Neurosci 2006;26:550-8.
  • Kim HM, Wangemann P. Failure of fluid absorption in the endolymphatic sac initiates cochlear enlargement that leads to deafness in mice lacking pendrin expression. PLoS One 2010;5:e14041.
  • Riccomagno MM, Takada S, Epstein DJ. Wnt-dependent regulation of inner ear morphogenesis is balanced by the opposing and supporting roles of Shh. Genes Dev 2005;19:1612-23.
  • Acampora D, Merlo GR, Paleari L, Zerega B, Postiglione MP, Mantero S, et al. Craniofacial, vestibular and bone defects in mice lacking the Distal-less-related gene Dlx5. Development 1999;126:3795-809.
  • Hurd EA, Micucci JA, Reamer EN, Martin DM. Delayed fusion and altered gene expression contribute to semicircular canal defects in Chd7 deficient mice. Mech Dev 2012;129:308-23.
  • Sennaroğlu L, Bajin MD. Classification and Current Management of Inner Ear Malformations. Balkan Med J 2017;34:397-411.
  • Everett LA, Glaser B, Beck JC, Idol JR, Buchs A, Heyman M, et al. Pendred syndrome is caused by mutations in a putative sulphate transporter gene (PDS). Nat Genet 1997;17:411-22.
  • Li XC, Everett LA, Lalwani AK, Desmukh D, Friedman TB, Green ED, et al. A mutation in PDS causes non-syndromic recessive deafness. Nat Genet 1998;18:215-7.
  • Phelps PD, Coffey RA, Trembath RC, Luxon LM, Grossman AB, Britton KE, et al. Radiological malformations of the ear in Pendred syndrome. Clin Radiol 1998;53:268-73.
  • Maciaszczyk K, Lewiński A. Phenotypes of SLC26A4 gene mutations: Pendred syndrome and hypoacusis with enlarged vestibular aqueduct. Neuro Endocrinol Lett 2008;29:29-36.
  • Wu CC, Lu YC, Chen PJ, Yeh PL, Su YN, Hwu WL, et al. Phenotypic analyses and mutation screening of the SLC26A4 and FOXI1 genes in 101 Taiwanese families with bilateral nonsyndromic enlarged vestibular aqueduct (DFNB4) or Pendred syndrome. Audiol Neurootol 2010;15:57-66.
  • Gong WX, Gong RZ, Zhao B. HRCT and MRI findings in X-linked non-syndromic deafness patients with a POU3F4 mutation. Int J Pediatr Otorhinolaryngol 2014;78:1756-62.
  • Choi BY, An YH, Park JH, Jang JH, Chung HC, Kim AR, et al. Audiological and surgical evidence for the presence of a third window effect for the conductive hearing loss in DFNX2 deafness irrespective of types of mutations. Eur Arch Otorhinolaryngol 2013;270:3057-62.
  • Anger GJ, Crocker S, McKenzie K, Brown KK, Morton CC, Harrison K, et al. X-linked deafness-2 (DFNX2) phenotype associated with a paracentric inversion upstream of POU3F4. Am J Audiol 2014;23:1-6.
  • de Kok YJ, van der Maarel SM, Bitner-Glindzicz M, Huber I, Monaco AP, et al. Association between X-linked mixed deafness and mutations in the POU domain gene POU3F4. Science 1995;267:685-8.
  • de Kok YJ, Vossenaar ER, Cremers CW, Dahl N, Laporte J, Hu LJ, et al. Identification of a hot spot for microdeletions in patients with X-linked deafness type 3 (DFN3) 900 kb proximal to the DFN3 gene POU3F4. Hum Mol Genet 1996;5:1229-35.
  • Parzefall T, Frohne A, Koenighofer M, Kirchnawy A, Streubel B, Schoefer C, et al. Identification of a rare COCH mutation by whole-exome sequencing : Implications for personalized therapeutic rehabilitation in an Austrian family with non-syndromic autosomal dominant late-onset hearing loss. Wien Klin Wochenschr 2018;130:299-306.
  • Robertson NG, Lu L, Heller S, Merchant SN, Eavey RD, McKenna M, et al. Mutations in a novel cochlear gene cause DFNA9, a human nonsyndromic deafness with vestibular dysfunction. Nat Genet 1998;20:299-303.
  • Hildebrand MS, Tack D, Deluca A, Hur IA, Van Rybroek JM, McMordie SJ, et al. Mutation in the COCH gene is associated with superior semicircular canal dehiscence. Am J Med Genet A 2009;149A:280-5.
  • Dodson KM, Georgolios A, Barr N, Nguyen B, Sismanis A, Arnos KS, et al. Etiology of unilateral hearing loss in a national hereditary deafness repository. Am J Otolaryngol 2012;33:590-4. de Varebeke SP, Termote B, Van Camp G, Govaerts PJ, Schepers S, Cox T, et al. Focal sclerosis of semicircular canals with severe DFNA9 hearing impairment caused by a P51S COCH-mutation: is there a link? Otol Neurotol 2014;35:1077-86.
  • Shindo S, Ikezono T, Ishizaki M, Sekiguchi S, Mizuta K, Li L, et al. Spatiotemporal expression of cochlin in the inner ear of rats during postnatal development. Neurosci Lett 2008;444:148-52.
  • Diaz-Horta O, Abad C, Sennaroglu L, Foster J, DeSmidt A, Bademci G, et al. ROR1 is essential for proper innervation of auditory hair cells and hearing in humans and mice. Proc Natl Acad Sci USA 2016;113:5993-8.
  • Bademci G, Abad C, Incesulu A, Elian F, Reyahi A, Diaz-Horta O, et al. FOXF2 is required for cochlear development in humans and mice. Hum Mol Genet 2019;28:1286-97.
Balkan Medical Journal-Cover
  • ISSN: 2146-3123
  • Başlangıç: 2015
  • Yayıncı: Erkan Mor