Abnormal hemoglobins associated with the beta-globin gene in Antalya province, Turkey

Abnormal hemoglobins are the most common hemoglobinopathies after beta-thalassemia in the world. More than 40 abnormal hemoglobin variants have been reported in the Turkish population. Therefore, it is one of the target areas for carrier screening. In our study, we aimed to screen the abnormal hemoglobins that cause clinical thalassemia in the Antalya population. Materials and methods: The present study identified the abnormal hemoglobins associated with the beta-globin gene using different molecular genetic techniques following high performance liquid chromatography (HPLC) results. We studied 972 postnatal and 361 prenatal cases (total: 1333 cases, 2666 chromosomes) with the disorder from 1998 up to July 2008. DNA extraction from peripheral blood, chorionic villi samples (CVS), amniotic cells, and cord blood samples was carried out using standard procedures. Following polymerase chain reaction (PCR) and amplification of the beta-globin gene, allele refractory mutation system (ARMS), reverse dot blot hybridization (RDBH), Nanochip, and DNA sequencing were performed to identify the mutations. Variable number of tandem repeats (VNTR) analysis was used for elimination of maternal contamination in prenatal diagnosis. We identified and characterized abnormal hemoglobin variants with novel and rare beta-thalassemic mutations. Results: Seven different abnormal hemoglobins were found in Antalya province, Turkey, namely Hb Antalya, Hb Tyne, HbS, Hb G-Coushatta, HbE, Hb Knossos, and Hb D-Los Angeles. Conclusion: Some of the abnormal hemoglobin variants found are unstable and some of them cannot be detected by simple electrophoretic examinations. Our findings suggest that abnormal hemoglobins are more frequent than expected among the other abnormal hemoglobins found in Turkey, and it is important both to perform prenatal diagnosis and to give genetic counseling for abnormal hemoglobins to families at risk for thalassemia.

Abnormal hemoglobins associated with the beta-globin gene in Antalya province, Turkey

Abnormal hemoglobins are the most common hemoglobinopathies after beta-thalassemia in the world. More than 40 abnormal hemoglobin variants have been reported in the Turkish population. Therefore, it is one of the target areas for carrier screening. In our study, we aimed to screen the abnormal hemoglobins that cause clinical thalassemia in the Antalya population. Materials and methods: The present study identified the abnormal hemoglobins associated with the beta-globin gene using different molecular genetic techniques following high performance liquid chromatography (HPLC) results. We studied 972 postnatal and 361 prenatal cases (total: 1333 cases, 2666 chromosomes) with the disorder from 1998 up to July 2008. DNA extraction from peripheral blood, chorionic villi samples (CVS), amniotic cells, and cord blood samples was carried out using standard procedures. Following polymerase chain reaction (PCR) and amplification of the beta-globin gene, allele refractory mutation system (ARMS), reverse dot blot hybridization (RDBH), Nanochip, and DNA sequencing were performed to identify the mutations. Variable number of tandem repeats (VNTR) analysis was used for elimination of maternal contamination in prenatal diagnosis. We identified and characterized abnormal hemoglobin variants with novel and rare beta-thalassemic mutations. Results: Seven different abnormal hemoglobins were found in Antalya province, Turkey, namely Hb Antalya, Hb Tyne, HbS, Hb G-Coushatta, HbE, Hb Knossos, and Hb D-Los Angeles. Conclusion: Some of the abnormal hemoglobin variants found are unstable and some of them cannot be detected by simple electrophoretic examinations. Our findings suggest that abnormal hemoglobins are more frequent than expected among the other abnormal hemoglobins found in Turkey, and it is important both to perform prenatal diagnosis and to give genetic counseling for abnormal hemoglobins to families at risk for thalassemia.

___

  • Sanger F, Coulson AR: A rapid method for determining sequences in DNA by primed synthesis with DNA polymerase. J Mol Biol 1975; 94: 441-46.
  • Keser I, Manguoglu E, Guzeloglu-Kayisli O, Kurt F, Mendilcioglu I, Simsek M et al. Prenatal diagnosis of beta- thalassemia in Antalya province. Turk J Med Sci 2005: 35: 251- 3.
  • Keser I, Kayisli OG, Yesilipek A, Ozes N, Luleci G. Hb Antalya: a new unstable variant leading to chronic microcytic anemia and high HbA2. Hemoglobin 2001; 25: 369-73.
  • Altay C, Gurgey A. Distribution of hemoglobinopathies in Turkey. Turkish J Pediatr 1986; 28: 219-29.
  • Aluoch JR, Kılınç Y, Aksoy M, Yuregir GT, Bakioglu I, Kutlar A et al. Sickle cell anemia among Eti-Turks: Haematological, clinical and genetics observations. Br J Haematol 1986; 64: 45- 55.
  • Langdown JV, Williamson D, Beresford CH, Gibb I, Taylor R, Deacon-Smith R. A new beta chain variant, Hb Tyne [beta 5 (A2)Pro→Ser]. Hemoglobin 1994; 18 (4-5): 333-6.
  • Guzeloglu Kayisli O, Keser I, Canatan D, Sanlıoglu A, Ozes ON, Yesilipek A et al. Compound heterozygosity for two beta chain variants: The mildly unstable Hb Tyne [CODON 5 Pro→Ser] and Hb S [CODON 6Glu→Val]. Turk J Haematol 2005; 22(1): 37-40.
  • El-Hashemite N, Petrou M, Khalifa AS, Heshmat NM, Rady MS, Delhanty JD. Identification of novel Asian Indian and Japanese mutations causing Beta-thalassemia in the Egyptian population. Hum.Genet 1997; 99: 271-4.
  • Sargin CF, Nal N, Manguoglu AE, Keser I, Mendilcioglu I, Yesilipek A et al. The Phenotypic effect of Hb G-Coushatta [B22 (B4) Glu—Ala] and Association with IVS.II.1(G-A) In a Turkish Family. Genetic Counseling 2005; 16(3): 307-8.
  • Weatherall DJ. Introduction to the problem of hemoglobin EB thalassemia. J Pediatr Hematol Oncol 2000; 22: 551.
  • Fessas PH, Loukopoulos D, Loutradi-Anagnostou A, Komis G: “Silent” P-thalassemia caused by a “silent” P-chain mutant: The pathogenesis of a syndrome of thalassemia intermedia. Br J Haematol 1982; 51: 577.
  • Keser I, Manguoglu E, Kayisli O, Yesilipek A, Luleci G. Combination of Hb Knossos [Cod 27 (G-T)] and IVSII-745 (C- G) in a Turkish Patient with Beta-Thalassemia Major. Genetic Testing 2007;11(3): 228-30.
  • Ozsoylu S. Homozygous hemoglobin D Punjab. Acta Haematol 1970; 43: 353-9.
  • Rahimi Z, Muniz A, Mozafari H. Abnormal hemoglobins among Kurdish population of Western Iran: hematological and molecular features. Mol Biol Rep. 2009 Mar 31.
  • Siala H, Ouali F, Messaoud T, Bibi A, Fattoum S. alpha- Thalassaemia in Tunisia: some epidemiological and molecular data. J Genet. 2008; 87: 229-34.
Turkish Journal of Medical Sciences-Cover
  • ISSN: 1300-0144
  • Yayın Aralığı: Yılda 6 Sayı
  • Yayıncı: TÜBİTAK
Sayıdaki Diğer Makaleler

Asymptomatic carriage of bacteria in food workers in Nilüfer district, Bursa, Turkey

Nalan AKIŞ, Melda SINIRTAŞ, Suna GEDİKOĞLU, Hamdi AYTEKİN, Cüneyt ÖZAKIN, Kayıhan PALA

Comparative evaluation of the antifungal susceptibility of Candida isolates from blood specimens: results of a study in a tertiary care hospital in Bursa, Turkey

Canan EVCİ, Beyza ENER, Güher GÖRAL, Sevim AKÇAĞLAR

Comparison of serum levels of IL-6, IL-8, TNF-α, C reactive protein and heat shock protein 70 in patients with active or inactive Behçet’s disease

Ayşe Serap KARADAĞ, Remzi KARADAĞ, Yüksel TOTAN, Ramazan YİĞİTOĞLU, Gülfer AKBAY, Murat AYDIN, Ramazan YAĞCI, Cemile KOCA, Meral EKŞİOĞLU

Comparison of remifentanil, alfentanil, and fentanil -administered with propofol to facilitate laryngeal mask insertion

Mehmet Emin ORHAN, Uğur GÖKTAŞ, Ali SIZLAN, Ceyda ÖZHAN, Mehmet Özgür ÖZHAN, Ercan KURT

The effect of intradialytic food intake on the urea reduction ratio and single-pool Kt/V values in patients followed-up at a hemodialysis center*

Belgüzar KARA, Cengiz Han AÇIKEL

The prognostic value of histological grade in the outcome of patients with invasive breast cancer

Gül DAĞLAR, Yunus Nadi YÜKSEK, Ahmet Uğur GÖZALAN, Tanju TÜTÜNCÜ, Yeşim GÜNGÖR, Nuri Aydın KAMA

Four cases of myotonia congenita in a Turkish family*

Recep AYGÜL, Gökhan ÖZDEMİR, Dilcan KOTAN

Abnormal hemoglobins associated with the beta-globin gene in Antalya province, Turkey

İbrahim KESER, Akif YEŞİLİPEK, Duran CANATAN, Güven LÜLECİ

Ali SIZLAN, Uğur GÖKTAŞ, Ceyda ÖZHAN, Mehmet Özgür ÖZHAN, Mehmet Emin ORHAN, Ercan KURT

Underlying diseases of recurrent pneumonia in Turkish children*

Osman ÖZDEMİR, Sinan SARI, Arzu BAKIRTAŞ, Pelin ZORLU, Ülker ERTAN