Preliminary Results on Genome Mapping of an Italia x Mercan Grapevine Population

This research was conducted to construct genetic linkage maps of Vitis (2n = 38) from grape populations (60 F1 + 2 parents) of crossing of Italia and Mercan (Vitis vinifera L.) cultivars. RAPD reactions were performed using a total of 300 RAPD primers. The amplification products were scored from negatives as presence or absence. Only 59 loci for Italia and 55 loci for Mercan could be used for linkage analysis. Mapmaker/Exp.3.0 was used for genetic linkage analysis with multipoint ordering among markers at LOD >= 3.0 score. The map was developed by using the double pseudo-testcross mapping approach. Italia and Mercan resulted in 8 (maternal) and 6 (paternal) linkage groups, respectively. Loci placed on the linkage groups were further analyzed by regression and analyses of variances in order to determine possible linkages between the loci and morphological and disease resistance characteristics. According to the results, only 2 characters, flowering time and resistance to powdery mildew, were significantly linked (P >= 0.01) to 1 and 2 marker loci, respectively. Other significant (P >= 0.05) marker-QTL relationships were also found for various traits from regression analysis.

Preliminary Results on Genome Mapping of an Italia x Mercan Grapevine Population

This research was conducted to construct genetic linkage maps of Vitis (2n = 38) from grape populations (60 F1 + 2 parents) of crossing of Italia and Mercan (Vitis vinifera L.) cultivars. RAPD reactions were performed using a total of 300 RAPD primers. The amplification products were scored from negatives as presence or absence. Only 59 loci for Italia and 55 loci for Mercan could be used for linkage analysis. Mapmaker/Exp.3.0 was used for genetic linkage analysis with multipoint ordering among markers at LOD >= 3.0 score. The map was developed by using the double pseudo-testcross mapping approach. Italia and Mercan resulted in 8 (maternal) and 6 (paternal) linkage groups, respectively. Loci placed on the linkage groups were further analyzed by regression and analyses of variances in order to determine possible linkages between the loci and morphological and disease resistance characteristics. According to the results, only 2 characters, flowering time and resistance to powdery mildew, were significantly linked (P >= 0.01) to 1 and 2 marker loci, respectively. Other significant (P >= 0.05) marker-QTL relationships were also found for various traits from regression analysis.

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  • Adam-Blondon, A.-F., C. Roux, D. Claux, G. Butterlin, D. Merdinoğlu and P. This. 2004. Mapping 245 SSR markers on the Vitis vinifera genome: a tool for grape genetics. Theor. Appl. Genet. 109: 1017-1027.
  • Brar, D.S. 2002. Molecular marker assisted breeding. In: Jain, S.M., Brar, D.S. and Ahloowalia, B.S. (eds.) Molecular techniques in crop improvement. Kluwer Academic Publishers. 616 p.
  • Dalbó, M.A., G.N. Ye, N.F. Weeden, W.F. Wilcox and B.I. Reisch. 2001. Marker- assisted selection for powdery mildew resistance in grapes. J. Amer. Soc. Hort. Sci. 126: 83-89.
  • Doligez, A., A. Bouquet, Y. Danglot, F. Lahogue, S. Riaz, C.P. Meredith, K.J. Edwards and P. This. 2002. Genetic mapping of grapevine (Vitis vinifera L.) applied to the detection of QTLs for seedlessness and berry weight. Theor. Appl. Genet.105: 780-795.
  • Doucleff, M., Y. Jin, F. Gao, S. Riaz, A.F. Krivanek and M.A. Walker. 2004. A genetic linkage map of grape, utilizing Vitis rupestris and Vitis arizonica. Theor. Appl. Genet., 109: 1178-1187.
  • Eibach, R. 1994. Investigations about the genetic resources of grapes with regard to resistance characteristics to powdery mildew (Oidium tuckeri). Vitis 33: 143-150.
  • Fischer, B.M., I. Slakhutdinov, M. Akkurt, R. Eibach, K.J. Edwards, R. Töpher and analysis of fungal disease resistance factors on a molecular map of grapevine. Theor. Appl. Genet. 108: 501-515.
  • Galet, P. 1979. A Practical Ampelography. Cornell Univ. Press, Ithaca, NY. 248 p.
  • Grando, M.S., D. Bellin, K.J. Edwards, C. Pozzi, M. Stefanini and R. Velasco. 2003. Molecular linkage maps of Vitis vinifera L. and Vitis riparia Mchx. Theor. Appl. Genet. 106: 1213-224.
  • Haldane, J.B.S. 1919. The combination of linkage values, and the calculation of distance between the loci of linked markers. J. Genet. 8: 299-309.
  • Hyne, V. and M.J. Kearsey. 1995. QTL analysis: Further uses of marker regression. Theor. Appl. Genet., 91; 471-476.
  • Kelly, J.D. 1995. Use of random amplified polymorphic DNA markers in breeding for Hortscience, 30: 461-465.
  • Lander, E.S., P. Green, J. Abrahamson, A. Barlow, M.J. Daly, S.E. Lincoln and L. Newberg. 1987. MAPMAKER, An interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1: 174- 181.
  • Lodhi, M.A., G.N. Ye, N.F. Weeden and B.I. Reisch. 1994. A simple and efficient method for DNA extraction from grapevine cultivars and Vitis species. Plant Mol. Biol. Reptr. 12: 6-13.
  • Lodhi, M.A., M.A. Daly, N.F. Weeden and B.I. Reisch. 1995. A molecular marker based linkage map of Vitis. Genome 38: 786-794.
  • Malyshev, S.V. and N.A. Kartel. 1997. Molecular markers in mapping plant genomes, Molecular Biology, 31: 163-171.
  • Riaz, S., G.S. Dangl, K.J. Edwards and C.P. Meredith. 2004. A microsatellite marker based vinifera L. Theor. Appl. Genet., 108; 864-872.
  • framework linkage map of Vitis
  • Sambrook, J., E.F. Fritsch and T. Maniatis. 1989. Synthesis of uniformly labeled DNA probes using random oligonucleotide primers. In: Molecular cloning. 2nded. Laboratory, Cold Spring Harbor, N.Y. pp.10-13. Cold Spring Harbor
  • Tulsieram, L. K., J.C. Glaubitz, G. Kiss and J.E. Carlson. 1992. Single tree genetic linkage mapping in conifers using haploid DNA from megagametophytes. Bio/Tech., 10: 686-690.
  • Van Ooijen, J.W. 1992. Segregation of isozyme markers and cold tolerance in an interspesific backcross of tomato. Theor. Appl. Genet., 66; 241-247.
  • Weeden, N.F., M. Hemmat, D.M. Lawson, M. Lodhi, R.L. Bell, A.G. Manganaris, B.I. Reisch, S.K. Brown and G.N. Ye. 1994. Development and application of molecular linkage maps in woody fruit crops. Euphytica 77: 71-75.
Turkish Journal of Agriculture and Forestry-Cover
  • ISSN: 1300-011X
  • Yayın Aralığı: Yılda 6 Sayı
  • Yayıncı: TÜBİTAK
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Preliminary Results on Genome Mapping of an Italia x Mercan Grapevine Population

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Effects of Some Plant Materials on Phytophthora Blight (Phytophthora capsici Leon.) of Pepper

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