The First Detection and Phylogenetic Analysis of Bovine Astrovirus from Diarrheic Calves in Turkey
A total of 127 stool samples (rectal swab) from diarrheic calves, up to one mouth of age, were collected
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- 1. Alfred N, Liu H, Li ML, Hong SF, Tang HB, Wei ZZ,
Chen Y, Li FK, Zhong YZ, Huang WJ, (2015). Molecular
epidemiology and phylogenetic analysis of diverse bovine
astroviruses associated with diarrhea in cattle and water
buffalo calves in China. J Vet Med Sci, 77, 643–651.
DOI:10.1292/jvms.14-0252
- 2. Atkins A, Wellehan JF Jr, Childress AL, Archer LL,
Fraser WA, Citino SB, (2009). Characterization of an
outbreak of astroviral diarrhea in a group of cheetahs
(Acinonyx jubatus). Vet Microbiol, 136, 160–165, 2009.
DOI:10.1016/j.vetmic.2008.10.035
- 3. Bartels CJM, Holzhauer M, Jorritsma R, et al (2010)
Prevalence, prediction and risk factors of enteropathogens
in normal and non-normal faeces of young Dutch dairy
calves. Prev Vet Med 93:162–169. doi: 10.1016/j.
prevetmed.2009.09.020
- 4. Benedictis PD, Schultz-Cherry S, Burnham A, Cattoli
G, (2011). Astrovirus infections in humans and animals
– Molecular biology, genetic diversity, and interspecies
transmissions. Infect Genet Evol, 11, 1529–1544.
DOI:10.1016/j.meegid.2011.07.024
- 5. Bridger JC, Hall GA, Brown JF, (1984). Characterization
of a calici-like virus (Newbury agent) found in association
with astrovirus in bovine diarrhea. Infect Immun, 43,
133–138.
- 6. Candido M, Alencar ALF, Almeida-Queiroz SR, Buzinaro
MG, Munin FS, de Godoy SHS, Livonesi MC, Fernandes
AM, de Sousa RLM, (2015). Molecular detection and
phylogenetic analysis of bovine astrovirus in Brazil. Arch
Virol, 160, 1519–1525. DOI: 10.1007/ s00705-015-2400-8
- 7. Chen X, Zhang B, Yue H, Wang Y, Zhou F, Zhang Q, Tang
C, (2015). A novel astrovirus species in the gut of yaks
with diarrhoea in the Qinghai–Tibetan Plateau, 2013. J
Gen Virol, 96, 3672–3680. DOI:10.1099/jgv.0.000303
- 8. Cho Y il, Yoon KJ (2014) An overview of calf diarrhea -
infectious etiology, diagnosis, and intervention. J Vet Sci
15:1–17. doi: 10.4142/jvs.2014.15.1.1
- 9. Chu DK, Chin AW, Smith GJ, Chan KH, Guan Y, Peiris JS,
Poon LL, (2010). Detection of novel astroviruses in urban
brown rats and previously known astroviruses in humans.
J Gen Virol, 91, 2457–2462. DOI:10.1099/vir.0.022764-0
- 10. Jonassen CM, Jonassen TO, Saif YM, Snodgrass DR,
Ushijima H, Shimizu M, Grinde B, (2001). Comparison
of capsid sequences from human and animal astroviruses.
J Gen Virol, 82, 1061–1067. DOI:10.1099/0022-1317-82-
5-1061
- 11. Li L, Diab S, Mc Graw S, Barr B, Traslavina R, Higgins
R, Talbot T, Blanchard P, Rimoldi G, Fahsbender E, Page
B, Phan TG, Wang C, Deng X, Pesavento P, Delwart E,
(2013). Divergent astrovirus associated with neurologic
disease in cattle. Emerging Infect Dis, 19, 1385-1392.
DOI: 10.3201/eid1909.130682
- 12. Mendez E, Arias CF, (2007). Astroviruses. Knipe DM,
Howley PM eds. Fields virology. Lippincott Williams &
Wilkins, Philadelphia, USA, p.981-1000.
- 13. Monroe SS, (2005). Astroviridae. Carter MJ, Herrmann
J, Mitchel JK Sanchez-Fauquier A eds. Virus taxonomy.
Eighth report of the International Committee on Taxonomy
of Viruses.Elsevier, Amsterdam, The Netherlands. P.859-
864.
- 14. Mohamed FF, Mansour FMG, El-Araby IE, Mor SK,
Goyal SM, (2017). Molecular detection of enteric viruses
from diarrheic calves in Egypt. Arch Virol, 162, 129–137.
DOI: 10.1007/s00705-016-3088-0
- 15. Nagai M, Omatsu T, Aoki H, Otomaru K, Uto T, Koizumi
M, Minami-Fukuda F, Takai H, Murakami T, Masuda
T, Yamasato H, Shiokawa M, Tsuchiaka S, Naoi Y,
Sano K, Okazaki S, Katayama Y, Oba M, Furuya T,
Shirai J, Mizutani T, (2015). Full genome analysis of
bovine astrovirus from fecal samples of cattle in Japan:
identification of possible interspecies transmission of
bovine astrovirus. Arch Virol, 160, 2491–2501. DOI:
10.1007/ s00705-015-2543-7
- 16. Okonechnikov K, Golosova O, Fursov M, and UGENE
Team: Unipro UGENE, (2012). A unified bioinformatics
toolkit. Bioinformatics, 28, 1166–1167. DOI: 10.1093/
bioinformatics/bts091
- 17. Pham NTK, Khamrin P, Nguyen TA, et al (2007) Isolation
and Molecular Characterization of Aichi Viruses from
Fecal Specimens Collected in Japan, Bangladesh,
Thailand, and Vietnam. J Clin Microbiol 45:2287–2288.
doi: 10.1128/JCM.00525-07
- 18. Reuter G, Boros Á, Pankovics P (2011) Kobuviruses - a
comprehensive review. Rev Med Virol 21:32–41. doi:
10.1002/rmv.677
- 19. Rivera R, Nollens HH, Venn-Watson S, Gulland
FM, Wellehan JF Jr, (2010). Characterization of
phylogenetically diverse astroviruses of marine mammals.
J Gen Virol, 91, 166–173. DOI:10.1099/vir.0.015222-0
- 20. Schlotta K, Schulze C, Bilk S, Hanke D, Hoeper D, Beer
M, Hoffmann B, (2016). Detection of a Novel Bovine
Astrovirus in a Cow with Encephalitis. Transbound Emerg
Dis, 63, 253–259. DOI:10.1111/tbed.12493
- 21. Selimovic-Hamza S, Bouzalas IG, Vandevelde M,
Oevermann A, and Seuberlich T, (2016). Detection of
astrovirus in historical cases of european sporadic Bovine
encephalitis, switzerland 1958–1976. Front Vet Sci, 3, 91.
DOI:10.3389/fvets.2016.00091
- 22. Sharp CP, Gregory WF, Mason C, deC Bronsvoort BM,
Beard PM, (2015). High prevalence and diversity of
bovine astroviruses in the faeces of healthy and diarrhoeic
calves in South West Scotland. Vet Microbiol, 178, 70–76.
DOI:10.1016/j.vetmic.2015.05.002
- 23. Smits SL, Van LM, Kuiken T, Hammer AS, Simon JH,
Osterhaus AD, (2010). Identification and characterization
of deer astroviruses. J Gen Virol, 91, 2719–2722. DOI:
10.1099/vir. 0.024067-0
- 24. Snodgrass DR, Gray EW, (1977). Detection and
transmission of 30 nm virus particles (astroviruses) in
faeces of lambs with diarrhoea. Arch Virol, 55, 287–291.
- 25. Tse H, Chan WM, Tsoi HW, Fan RY, Lau CC, Lau SK,
Woo PC, Yuen KY, (2011). Rediscovery and genomic
characterization of bovine astroviruses. J Gen Virol 92,
1888–1898. DOI:10.1099/vir.0.030817-0
- 26. Turan T, Işıdan H, Atasoy MO, İrehan B, (2018). Detection
and molecular analysis of bovine enteric norovirus and
nebovirus in Turkey. J Vet Res 62, 129-135. DOI:10.2478/
jvetres-2018-0021
- 27. Woode GN, Bridger JC, (1978). Isolation of small viruses
resembling astroviruses and caliciviruses from acute
enteritis of calves. J Med Microbiol, 11, 441– 452. DOI:
10.1099/00222615-11-4-441
- 28. Woode GN, Pohlenz JF, Gourley NE, Fagerland JA,
(1984). Astrovirus and Breda virus infections of dome cell
epithelium of bovine ileum. J Clin Microbiol, 19: 623–
630. DOI: 0095-1137/84/050623-08$02.00/0